RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 ZNF888P0CJ79 500 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 PRR23D2P0DMB1 279 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 SLC2A3P11169 496 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 UMPSP11172 480 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 PABPC1P11940 636 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 MLNP12872 115 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 FAHP16930 419 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 BPIP17213 487 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 CALB2P22676 271 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 TNFSF4P23510 183 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 GIFP27352 417 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 MAPK4P31152 587 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 CHRNA7P36544 502 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 SPAM1P38567 509 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 GRIA2P42262 883 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 DPP6P42658 865 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 GSTM5P46439 218 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 CDKN1BP46527 198 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 GLRBP48167 497 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 GSSP48637 474 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 SLC11A1P49279 550 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 CCR5P51681 352 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ARFIP2P53365 341 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 METAP1P53582 386 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 POLE2P56282 527 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 C1QTNF8P60827 252 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 YWHAEP62258 255 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 GLO1Q04760 184 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 FCHO2Q0JRZ9 810 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 LRMPQ12912 555 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ART3Q13508 389 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 PLS1Q14651 629 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 PCBP1Q15365 356 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 TSTQ16762 297 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 KRT24Q2M2I5 525 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 NKAIN1Q4KMZ8 207 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 YIF1BQ5BJH7 314 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 SGO1Q5FBB7 561 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 FBXO47Q5MNV8 452 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ARHGAP17Q68EM7 881 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ANKRD40Q6AI12 368 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 MRM1Q6IN84 353 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 TIGD7Q6NT04 549 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 APOA5Q6Q788 366 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF813Q6ZN06 617 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 DENND5BQ6ZUT9 1274 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 SCN4BQ8IWT1 228 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 TRIM48Q8IWZ4 208 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 FUKQ8N0W3 1084 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 RTL3Q8N8U3 475 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 OR8J2Q8NGG1 315 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 FAM71BQ8TC56 605 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 FNDC8Q8TC99 324 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 HASPINQ8TF76 798 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 AUTS2Q8WXX7 1259 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 LPGAT1Q92604 370 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 P3H4Q92791 437 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 PHKBQ93100 1093 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 MYDGFQ969H8 173 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 NT5C3BQ969T7 300 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 RILPL2Q969X0 211 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 IQCDQ96DY2 449 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 NEIL1Q96FI4 390 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 TMEM41AQ96HV5 264 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ELMO2Q96JJ3 720 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF570Q96NI8 536 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 CENPKQ9BS16 269 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 THUMPD3Q9BV44 507 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 EDEM2Q9BV94 578 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 BBS2Q9BXC9 721 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 TRIM54Q9BYV2 358 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 QRSL1Q9H0R6 528 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 EPB41L5Q9HCM4 733 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 FBRSL1Q9HCM7 1045 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 CABP5Q9NP86 173 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 SOHLH2Q9NX45 425 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 PTTG2Q9NZH5 202 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 VSX1Q9NZR4 365 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 BTBD7Q9P203 1132 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 C5AR2Q9P296 337 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 LRP2BPQ9P2M1 347 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 NUP50Q9UKX7 468 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF215Q9UL58 517 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 EIF3LQ9Y262 564 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 STXBP5LQ9Y2K9 1186 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 HBS1LQ9Y450 684 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 LRRC42Q9Y546 428 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 GMPPBQ9Y5P6 360 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ATP23Q9Y6H3 246 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 CLCA3PQ9Y6N3 262 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 MSH6P52701 1360 aa4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZC3H13Q5T200 1668 aaKnown RBP4.73□□□□□ -1.65
HMGB3P9-201ENST00000441799 CDHR2Q9BYE9 1310 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 NHSL1Q5SYE7 1610 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 MTMR11A4FU01 709 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF233A6NK53 670 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 C2orf74A8MZ97 194 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 SH2B2O14492 632 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 NEMP1O14524 444 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms