RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 EFCAB14O75071 495 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 ATP6AP2O75787 350 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 BCAS2O75934 225 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 MLYCDO95822 493 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 CKMP06732 381 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 CLTBP09497 229 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 SPATA31D3P0C874 917 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 NCF1P14598 390 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 ITGALP20701 1170 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 PEX2P28328 305 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 DPP6P42658 865 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 MAPK8P45983 427 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 ACADVLP49748 655 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 RPL26P61254 145 aaKnown RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 IRX1P78414 480 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 MRPS22P82650 360 aaKnown RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 ADGRE1Q14246 886 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 LRRC36Q1X8D7 754 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 UGT3A2Q3SY77 523 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 RARS2Q5T160 578 aaKnown RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 CAPRIN2Q6IMN6 1127 aaKnown RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 PAOXQ6QHF9 649 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 CERS6Q6ZMG9 384 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 RNF111Q6ZNA4 994 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 SPATA31D4Q6ZUB0 917 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 FRA10AC1Q70Z53 315 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 TMCO2Q7Z6W1 182 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 METTL3Q86U44 580 aaKnown RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 SPATA24Q86W54 205 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 APLFQ8IW19 511 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 FAM217AQ8IXS0 508 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 PIANPQ8IYJ0 282 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 CPNE9Q8IYJ1 553 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 APCDD1Q8J025 514 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 ELMOD1Q8N336 334 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 MIER2Q8N344 545 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 CPXM2Q8N436 756 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 RNF148Q8N7C7 305 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 PCYOX1LQ8NBM8 494 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 HMGCLL1Q8TB92 370 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 WFDC5Q8TCV5 224 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 CD200R1Q8TD46 325 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 ZNF483Q8TF39 744 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 UCMAQ8WVF2 138 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 KCNJ9Q92806 393 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 FUBP1Q96AE4 644 aaKnown RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 MIEF2Q96C03 454 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 TUBGCP3Q96CW5 907 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 ALG14Q96F25 216 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 C3orf30Q96M34 536 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 BIRC8Q96P09 236 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 KCNA7Q96RP8 456 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 SLC30A3Q99726 388 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 AKTIPQ9H8T0 292 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 FBRSL1Q9HCM7 1045 aaKnown RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 ZDHHC7Q9NXF8 308 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 CACNA2D2Q9NY47 1150 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 IL17CQ9P0M4 197 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 KIAA1522Q9P206 1035 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-218ENST00000439806 GALPQ9UBC7 116 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 ADAMTS6Q9UKP5 1117 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 SARDHQ9UL12 918 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 BTRCQ9Y297 605 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 MED16Q9Y2X0 877 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 NDUFAF1Q9Y375 327 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 PCDHGA7Q9Y5G6 932 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 OR51B4Q9Y5P0 310 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 DNAJC15Q9Y5T4 150 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 ANKRD12Q6UB98 2062 aa10.35□□□□□ -0.75
CPNE1-218ENST00000439806 C1orf232A0A0U1RR37 186 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 A6NHS1 94 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 E7ENX8 843 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 GFRA2O00451 464 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 FBP2O00757 339 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 PRMT5O14744 637 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-218ENST00000439806 PEX1O43933 1283 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 KLK8O60259 260 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 CYBBP04839 570 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 ALPIP09923 528 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 ALDOCP09972 364 aaKnown RBP10.34□□□□□ -0.75
CPNE1-218ENST00000439806 LINC00032P0C843 101 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 ZNF7P17097 686 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-218ENST00000439806 TCN1P20061 433 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-218ENST00000439806 GPX3P22352 226 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 RPS3P23396 243 aaKnown RBP eCLIP10.34□□□□□ -0.754e-8■■■□□ 18.1
CPNE1-218ENST00000439806 CSNK1DP48730 415 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 FOXA1P55317 472 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 WDR5P61964 334 aaKnown RBP10.34□□□□□ -0.75
CPNE1-218ENST00000439806 SLC7A9P82251 487 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 MS4A2Q01362 244 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 LMAN2Q12907 356 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 LRP8Q14114 963 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 PTPRRQ15256 657 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 SFT2D3Q587I9 215 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 C1orf53Q5VUE5 145 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 LYPLAL1Q5VWZ2 237 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 PRMT9Q6P2P2 845 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 LAYNQ6UX15 382 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 CCDC149Q6ZUS6 474 aa10.34□□□□□ -0.75
CPNE1-218ENST00000439806 GPRIN3Q6ZVF9 776 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms