RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 HMG20AQ9NP66 347 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 LSM3P62310 102 aaKnown RBP17.57■□□□□ 0.4
SNED1-204ENST00000401884 ITGADQ13349 1161 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 TOP3AQ13472 1001 aaPredicted RBP17.57■□□□□ 0.4
SNED1-204ENST00000401884 DGUOKQ16854 277 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 TMEM174Q8WUU8 243 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 KIFC1Q9BW19 673 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 LRTM1Q9HBL6 345 aa17.57■□□□□ 0.4
SNED1-204ENST00000401884 SNTNA6NMZ2 147 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 GSNP06396 782 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 SMYD5Q6GMV2 418 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 UBE2R2Q712K3 238 aaPredicted RBP17.56■□□□□ 0.4
SNED1-204ENST00000401884 SATL1Q86VE3 508 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 ARFGAP1Q8N6T3 406 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 DBF4BQ8NFT6 615 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 PRR11Q96HE9 360 aaPredicted RBP17.56■□□□□ 0.4
SNED1-204ENST00000401884 CDKN2AIPNLQ96HQ2 116 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 FEM1CQ96JP0 617 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 HS3ST4Q9Y661 456 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 KCNE2Q9Y6J6 123 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 GLYATL1P3A0A0U1RQE8 302 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 EOMESO95936 686 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 SPIDRQ14159 915 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 HERC3Q15034 1050 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 PAGE2BQ5JRK9 111 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 INTS11Q5TA45 600 aaKnown RBP17.56■□□□□ 0.4
SNED1-204ENST00000401884 ASRGL1Q7L266 308 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 IFNLR1Q8IU57 520 aaPredicted RBP17.56■□□□□ 0.4
SNED1-204ENST00000401884 KBTBD2Q8IY47 623 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 GORASP1Q9BQQ3 440 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 TRMUO75648 421 aaKnown RBP17.56■□□□□ 0.4
SNED1-204ENST00000401884 CCNFP41002 786 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 C1DQ13901 141 aaKnown RBP17.56■□□□□ 0.4
SNED1-204ENST00000401884 GRB14Q14449 540 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 SDE2Q6IQ49 451 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 CHADLQ6NUI6 762 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 ITCHQ96J02 903 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 SUSD3Q96L08 255 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 FCRL3Q96P31 734 aaPredicted RBP17.56■□□□□ 0.4
SNED1-204ENST00000401884 SMPD3Q9NY59 655 aaPredicted RBP17.56■□□□□ 0.4
SNED1-204ENST00000401884 TSC22D4Q9Y3Q8 395 aa17.56■□□□□ 0.4
SNED1-204ENST00000401884 AHDC1Q5TGY3 1603 aaPredicted RBP17.56■□□□□ 0.4
SNED1-204ENST00000401884 RNASEH1O60930 286 aaKnown RBP17.55■□□□□ 0.4
SNED1-204ENST00000401884 ESR1P03372 595 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 SPATA31D3P0C874 917 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 RPL17P18621 184 aaKnown RBP17.55■□□□□ 0.4
SNED1-204ENST00000401884 CCNA2P20248 432 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 RFX3P48380 749 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 HERVK_113P63132 956 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 SPATA31D4Q6ZUB0 917 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 ZNF605Q86T29 641 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 ZNF557Q8N988 423 aaPredicted RBP17.55■□□□□ 0.4
SNED1-204ENST00000401884 ZBED3Q96IU2 234 aaPredicted RBP17.55■□□□□ 0.4
SNED1-204ENST00000401884 PLEKHG4BQ96PX9 1271 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 MIPEPQ99797 713 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 SLC39A3Q9BRY0 314 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 ERVK-6Q9BXR3 956 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 NMUR1Q9HB89 426 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 ASAH2Q9NR71 780 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 SELENONQ9NZV5 590 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 G3V2T6 193 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 KPNA4O00629 521 aaPredicted RBP17.55■□□□□ 0.4
SNED1-204ENST00000401884 SELPP16109 830 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 NCK1P16333 377 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 RPS9P46781 194 aaKnown RBP17.55■□□□□ 0.4
SNED1-204ENST00000401884 CACNG1Q06432 222 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 DLG1Q12959 904 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 ATAD3AQ9NVI7 634 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 E7ENX8 843 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 RXRGP48443 463 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 RFX4Q33E94 735 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 CWF19L1Q69YN2 538 aaKnown RBP17.55■□□□□ 0.4
SNED1-204ENST00000401884 CYS1Q717R9 158 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 CANT1Q8WVQ1 401 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 REXO5Q96IC2 774 aaKnown RBP17.55■□□□□ 0.4
SNED1-204ENST00000401884 MFSD1Q9H3U5 465 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 RAD21L1Q9H4I0 556 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 CAPN10Q9HC96 672 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 HOXA11P31270 313 aaPredicted RBP17.55■□□□□ 0.4
SNED1-204ENST00000401884 CCR10P46092 362 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 ZNF33AQ06730 810 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 CCDC149Q6ZUS6 474 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 LEMD2Q8NC56 503 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 OR9I1Q8NGQ6 314 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 SMOC2Q9H3U7 446 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 TFB2MQ9H5Q4 396 aaKnown RBP17.55■□□□□ 0.4
SNED1-204ENST00000401884 PLGRKTQ9HBL7 147 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 ENOPH1Q9UHY7 261 aa17.55■□□□□ 0.4
SNED1-204ENST00000401884 UGT2B4P06133 528 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 GMPRP36959 345 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 NCF4Q15080 339 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 GDF6Q6KF10 455 aaPredicted RBP17.54■□□□□ 0.4
SNED1-204ENST00000401884 DOK6Q6PKX4 331 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 OFCC1Q8IZS5 231 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 SIDT2Q8NBJ9 832 aaKnown RBP17.54■□□□□ 0.4
SNED1-204ENST00000401884 ZNF540Q8NDQ6 660 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 ASB9Q96DX5 294 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 AKTIPQ9H8T0 292 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 PTGER3P43115 390 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 SIRPB2Q5JXA9 342 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms