RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 LMO3Q8TAP4 145 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 OSBPL10Q9BXB5 764 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 ALG2Q9H553 416 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 NOL6Q9H6R4 1146 aaKnown RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 ELOVL7A1L3X0 281 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 NELFEP18615 380 aaKnown RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 NR1D2Q14995 579 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 SPRYD7Q5W111 196 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 CAPN13Q6MZZ7 669 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 MACC1Q6ZN28 852 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 VN1R5Q7Z5H4 357 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 UNC5BQ8IZJ1 945 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 DDX1Q92499 740 aaKnown RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLC38A2Q96QD8 506 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 EBF4Q9BQW3 602 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 MIOSQ9NXC5 875 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLC7A8Q9UHI5 535 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 MFN2O95140 757 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 GOT2P00505 430 aaKnown RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 OGDHQ02218 1023 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 VARS2Q5ST30 1063 aaKnown RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 FAM46CQ5VWP2 391 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 ZNF57Q68EA5 555 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 NCBP2-AS2Q69YL0 99 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 REP15Q6BDI9 236 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 ARMC8Q8IUR7 673 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 MPP5Q8N3R9 675 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 ZBTB2Q8N680 514 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 TEFMQ96QE5 360 aaKnown RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 ZNF607Q96SK3 696 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 FBXO10Q9UK96 956 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 DPPA5A6NC42 116 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 CCL22O00626 93 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 UGT1A9O60656 530 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 CLDN9O95484 217 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLC35G4P0C7Q5 338 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 ZNF37AP17032 561 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 RNF220Q5VTB9 566 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 SYPL2Q5VXT5 272 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 FUT10Q6P4F1 479 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 TMC5Q6UXY8 1006 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLC35F5Q8WV83 523 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 OSBPL2Q9H1P3 480 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 MINDY3Q9H8M7 445 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 UGT1A7Q9HAW7 530 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 UGT1A10Q9HAW8 530 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 UGT1A8Q9HAW9 530 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 INTS10Q9NVR2 710 aaKnown RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 EVLQ9UI08 416 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 MFHAS1Q9Y4C4 1052 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 PCDHGC4Q9Y5F7 938 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 SNX10Q9Y5X0 201 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 GRM6O15303 877 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 PRAMEF1O95521 474 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 EOMESO95936 686 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 TRBC1P01850 177 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 JAG1P78504 1218 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 TRIM71Q2Q1W2 868 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 GLIS1Q8NBF1 620 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 KCTD13Q8WZ19 329 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 EHD3Q9NZN3 535 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 WASF2Q9Y6W5 498 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 TRIM43BA6NCK2 446 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 UGT2B15P54855 530 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 OLR1P78380 273 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLC18A2Q05940 514 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 THAP5Q7Z6K1 395 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 GATAD2AQ86YP4 633 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 CBR4Q8N4T8 237 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 CSGALNACT1Q8TDX6 532 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 RBM4BQ9BQ04 359 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 RBM4Q9BWF3 364 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 SPRTNQ9H040 489 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 CFAP97Q9P2B7 532 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 RGPD8O14715 1765 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 CBFA2T3O75081 653 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 TULP3O75386 442 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 RPS9P46781 194 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 GPX6P59796 221 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 LSM3P62310 102 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 SPIBQ01892 262 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 OLFML1Q6UWY5 402 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 TMEM199Q8N511 208 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 KLHL1Q9NR64 748 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 PLK2Q9NYY3 685 aa16.98■□□□□ 0.31
TRAPPC11-201ENST00000334690 SEPT4O43236 478 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLC1A2P43004 574 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 RPIAP49247 311 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 NRG1Q02297 640 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 INCA1Q0VD86 236 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 COX10Q12887 443 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 KCNA10Q16322 511 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 RFTN2Q52LD8 501 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 TIGD5Q53EQ6 642 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLC9A4Q6AI14 798 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 PIGVQ9NUD9 493 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 OXSMQ9NWU1 459 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 FNIP2Q9P278 1114 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 TBC1D14Q9P2M4 693 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms