RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 MFSD3Q96ES6 412 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 SLC27A5Q9Y2P5 690 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 GSTT2BP0CG30 244 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ADNP2Q6IQ32 1131 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 RAVER1Q8IY67 606 aaKnown RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 MECRQ9BV79 373 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 XKR8Q9H6D3 395 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ZNF225Q9UK10 706 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 PZPP20742 1482 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 E5RJQ4 531 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 GRIN3BO60391 1043 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 CTSOP43234 321 aaPredicted RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 HSPB3Q12988 150 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 PTPRNQ16849 979 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ZSWIM3Q96MP5 696 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 POPDC2Q9HBU9 364 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 CLPXO76031 633 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 MIPP30301 263 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 TUFMP49411 452 aaKnown RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ELF3P78545 371 aaPredicted RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 MCL1Q07820 350 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 RHEBQ15382 184 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 TTMPQ5BVD1 217 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 SHQ1Q6PI26 577 aaKnown RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ECHDC2Q86YB7 292 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ZNF280BQ86YH2 543 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 KCTD4Q8WVF5 259 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 PTPN18Q99952 460 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 LGR4Q9BXB1 951 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 FARSAQ9Y285 508 aaKnown RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 AK5Q9Y6K8 562 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 H3BRB1 525 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 HDCP19113 662 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 C2orf76Q3KRA6 126 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 PSRC1Q6PGN9 363 aaPredicted RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 FBXW2Q9UKT8 454 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 IGKV5-2P06315 115 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 C15orf59Q2T9L4 293 aaPredicted RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ZC3H12AQ5D1E8 599 aaKnown RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 AADACL2Q6P093 401 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 TMEM161BQ8NDZ6 487 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ZCCHC10Q8TBK6 192 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 GPATCH1Q9BRR8 931 aaKnown RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 SLC39A3Q9BRY0 314 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ABI3Q9P2A4 366 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ARHGEF12Q9NZN5 1544 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 FSBPO95073 299 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 HJURPQ8NCD3 748 aaPredicted RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 OR5T2Q8NGG2 359 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 OR5J2Q8NH18 312 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 TNFRSF25Q93038 417 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 CNTNAP5Q8WYK1 1306 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 MYH9P35579 1960 aaKnown RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 DPYSQ14117 519 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 PCID2Q5JVF3 399 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 MSL3Q8N5Y2 521 aaKnown RBP16.32■□□□□ 0.2
PTCH1-201ENST00000331920 LZTR1Q8N653 840 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 CEP76Q8TAP6 659 aa16.32■□□□□ 0.2
PTCH1-201ENST00000331920 ARCN1P48444 511 aaKnown RBP16.31■□□□□ 0.2
PTCH1-201ENST00000331920 CLCN7P51798 805 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 RAB10P61026 200 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 SLC9B1Q4ZJI4 515 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 NUP54Q7Z3B4 507 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 SPPL2CQ8IUH8 684 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 CRYBG2Q8N1P7 616 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 TRIM36Q9NQ86 728 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 BIVM-ERCC5R4GMW8 1640 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 CTBP1Q13363 440 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 CDK10Q15131 360 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 DHDDSQ86SQ9 333 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 ABRAQ8N0Z2 381 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 NKX2-3Q8TAU0 364 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 KCNE2Q9Y6J6 123 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 NOL4O94818 638 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 SCN1BQ07699 218 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 FBXO33Q7Z6M2 555 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 VNN3Q9NY84 501 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 KERAO60938 352 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 SLC22A3O75751 556 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 C1QBPQ07021 282 aaKnown RBP16.31■□□□□ 0.2
PTCH1-201ENST00000331920 BRMS1LQ5PSV4 323 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 ZDHHC17Q8IUH5 632 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 HCAR2Q8TDS4 363 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 BORCS5Q969J3 196 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 EMC3Q9P0I2 261 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 EIF1AXP47813 144 aaKnown RBP16.31■□□□□ 0.2
PTCH1-201ENST00000331920 C2orf80Q0P641 193 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 MTFR2Q6P444 385 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 XKRXQ6PP77 449 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 FAM47BQ8NA70 645 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 TRAPPC12Q8WVT3 735 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 HNRNPLLQ8WVV9 542 aaKnown RBP16.31■□□□□ 0.2
PTCH1-201ENST00000331920 ZYG11BQ9C0D3 744 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 SYNMO15061 1565 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 ARHGEF40Q8TER5 1519 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 ASTN2O75129 1339 aaPredicted RBP16.31■□□□□ 0.2
PTCH1-201ENST00000331920 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 PIWIL2Q8TC59 973 aaKnown RBP16.31■□□□□ 0.2
PTCH1-201ENST00000331920 AGAP11Q8TF27 550 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 MRPL45Q9BRJ2 306 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms