RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Trim71Q1PSW8 855 aaKnown RBP14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Nxpe4Q52KP5 543 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Adora2aQ60613 410 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Itln1bQ80ZA0 313 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Sfr1Q8BP27 319 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 B430218F22RikQ8BQR5 223 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Rap2cQ8BU31 183 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Fam221bQ8C627 487 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Sugp1Q8CH02 643 aaKnown RBP14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Slc22a19Q8VCA0 551 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 L2hgdhQ91YP0 464 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Bcl7aQ9CXE2 210 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Ifrd2Q9D8U0 441 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 ErmapQ9JLN5 566 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Cdh13Q9WTR5 714 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 AicdaQ9WVE0 198 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 DnpepQ9Z2W0 473 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Gm13283A0A087WPG5 182 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Gm21731A0A286YDE9 180 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Mgat4eA6H684 439 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Nlgn4lB0F2B4 945 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Tada2bD3Z4Z0 420 aaKnown RBP14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Zbtb10E9Q8X5 861 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 MlxO08609 298 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Cldn4O35054 210 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Scamp3O35609 349 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 P01679 107 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 JunP05627 334 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Cnr2P47936 347 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Gucy2eP52785 1108 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 A1bgQ19LI2 512 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 LcorlQ3U285 600 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Yipf3Q3UDR8 347 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Rabl6Q5U3K5 725 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 ChukQ60680 745 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Itih3Q61704 889 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 GkQ64516 559 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Cpa1Q7TPZ8 419 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 SybuQ8BHS8 665 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Svs2Q8BS30 375 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Naa25Q8BWZ3 972 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Bend5Q8C6D4 421 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Mark4Q8CIP4 752 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Ppp6cQ9CQR6 305 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Ccdc97Q9DBT3 340 aa14.71□□□□□ -0.05
Nup88-202ENSMUST00000108530 Jbts17Q8CE72 3214 aa14.71□□□□□ -0.06
Nup88-202ENSMUST00000108530 Cacna1dQ99246 2179 aa14.71□□□□□ -0.06
Nup88-202ENSMUST00000108530 Vmn2r94E9PZK8 818 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Sypl1O09117 261 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 HmgclP38060 325 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Ddx6P54823 483 aaKnown RBP14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Dsc1P55849 886 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Snrpd1P62315 119 aaKnown RBP14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Kir3dl1P83555 432 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Rbp1Q00915 135 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Msx2Q03358 267 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Calb2Q08331 271 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Ak8Q32M07 479 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 CamkmtQ3U2J5 323 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 ThrspQ62264 150 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 RgnQ64374 299 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Tmem198Q8BG75 360 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Nup93Q8BJ71 819 aaKnown RBP14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Prkaa2Q8BRK8 552 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Ston2Q8BZ60 895 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Olfr448Q8VES9 310 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Clca1Q9D7Z6 913 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Lima1Q9ERG0 753 aaKnown RBP14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Nxpe3B9EKK6 559 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Rad51ap2G3UW63 976 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 5730507C01RikJ3QPX0 416 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Sec22bO08547 215 aaKnown RBP14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Matn2O08746 956 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Ncam2O35136 837 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 DcxO88809 366 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Slc7a2P18581 657 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Kcnj2P35561 428 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Ptpn5P54830 541 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Slc8a1P70414 970 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 TsnQ62348 228 aaKnown RBP14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Hs3st2Q673U1 367 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Sel1l3Q80TS8 1137 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Disc1Q811T9 852 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 R3hcc1lQ8BJM3 775 aaKnown RBP14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Elp6Q8BK75 266 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Cndp1Q8BUG2 492 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Parp9Q8CAS9 866 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Camk1Q91YS8 374 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Slc44a3Q921V7 656 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Tcam1Q99NB3 548 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Tmem68Q9D850 329 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Ccdc22Q9JIG7 627 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Nufip1Q9QXX8 484 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 H2afyQ9QZQ8 372 aaKnown RBP14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Nupr1Q9WTK0 80 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Cdh22Q9WTP5 813 aa14.7□□□□□ -0.06
Nup88-202ENSMUST00000108530 Skint11A7XV14 364 aa14.69□□□□□ -0.06
Nup88-202ENSMUST00000108530 Zbed5B2RPU8 756 aa14.69□□□□□ -0.06
Nup88-202ENSMUST00000108530 Slc4a5E9Q3M5 1116 aa14.69□□□□□ -0.06
Nup88-202ENSMUST00000108530 Atn1O35126 1175 aa14.69□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms