RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 EMC3Q9P0I2 261 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 GAKO14976 1311 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 LRRC72A6NJI9 287 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 KHNYNO15037 678 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 ITGB1P05556 798 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 BEND5Q7L4P6 421 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 ZNF627Q7L945 461 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 MFSD3Q96ES6 412 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 SGK2Q9HBY8 427 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 USP42Q9H9J4 1324 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 B4DGG1 531 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 KDM4BO94953 1096 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 MXD1Q05195 221 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 PUM1Q14671 1186 aaKnown RBP eCLIP16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 TAS1R2Q8TE23 839 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 HTR3CQ8WXA8 447 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 TSPAN18Q96SJ8 248 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 METTL8Q9H825 291 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 CLDND1Q9NY35 253 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 MRPS33Q9Y291 106 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 GLUD1P00367 558 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 ELNP15502 786 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 SEMA5AQ13591 1074 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 COMTD1Q86VU5 262 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 SLC6A15Q9H2J7 730 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 HES2Q9Y543 173 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 ALOX5P09917 674 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 PRKAA2P54646 552 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 ERVK-24P63145 666 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 ZNF549Q6P9A3 640 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 TRHDEQ9UKU6 1024 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 L7N2F9 121 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 GZMAP12544 262 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 TIE1P35590 1138 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 VAMP2P63027 116 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 SLC15A2Q16348 729 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 CPSF6Q16630 551 aaKnown RBP eCLIP16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 C2orf27AQ580R0 203 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 WSCD1Q658N2 575 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 STK40Q8N2I9 435 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 SLC24A2Q9UI40 661 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 ZDHHC9Q9Y397 364 aa16.28■□□□□ 0.2
CACNA1A-258ENST00000638029 STBD1O95210 358 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 ZBTB6Q15916 424 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 ACTRT1Q8TDG2 376 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 ZNF184Q99676 751 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 THAP1Q9NVV9 213 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 DNAJC28Q9NX36 388 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 SAMHD1Q9Y3Z3 626 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 EIF1AYO14602 144 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 CBFA2T3O75081 653 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 PTX3P26022 381 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 FAUP35544 74 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 NFATC2Q13469 925 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 CNDP2Q96KP4 475 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 RIPOR3Q96MK2 946 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 ACSS2Q9NR19 701 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 PCDHA3Q9Y5H8 950 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 RGSL1A5PLK6 1076 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 IFNGP01579 166 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 SSTR1P30872 391 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 CCKBRP32239 447 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 DUSP4Q13115 394 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 ZC3H12AQ5D1E8 599 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 LRRC73Q5JTD7 316 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 VASH1Q7L8A9 365 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 DAGLBQ8NCG7 672 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 TBX5Q99593 518 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 MDFIC2A0A1B0GVS7 189 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 ENPP3O14638 875 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 GATBO75879 557 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 NTSR2O95665 410 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 CHRM5P08912 532 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 ZNF132P52740 706 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 PPP3R1P63098 170 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 COL9A2Q14055 689 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 PGM5Q15124 567 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 NDUFA9Q16795 377 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 SPESP1Q6UW49 350 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 METTL3Q86U44 580 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 RDH11Q8TC12 318 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 LRRC46Q96FV0 321 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 Q96MT0 163 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 PCDH9Q9HC56 1237 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 POLLQ9UGP5 575 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 PCDHB3Q9Y5E6 796 aa16.27■□□□□ 0.2
CACNA1A-258ENST00000638029 PGAM1P18669 254 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 BNIP3Q12983 259 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 NOXRED1Q6NXP6 359 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 GMCL1P1Q8NEA9 526 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 OR2AJ1Q8NGZ0 328 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 LRRC20Q8TCA0 184 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 DNAJA4Q8WW22 397 aaPredicted RBP16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 TAPBPLQ9BX59 468 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 IRF2BPLQ9H1B7 796 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 EHD1Q9H4M9 534 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 ABCC13Q9NSE7 274 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 ITPK1Q13572 414 aa16.27■□□□□ 0.19
CACNA1A-258ENST00000638029 NPNTQ6UXI9 565 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms