RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TRMT6Q9UJA5 497 aaKnown RBP18.03■□□□□ 0.48
SMPD3-211ENST00000568373 CCL26Q9Y258 94 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 SLC30A1Q9Y6M5 507 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 SIX3O95343 332 aaPredicted RBP18.02■□□□□ 0.48
SMPD3-211ENST00000568373 ESR1P03372 595 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 GFAPP14136 432 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 GKP32189 559 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 CDH13P55290 713 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 PPIGQ13427 754 aaKnown RBP eCLIP18.02■□□□□ 0.48
SMPD3-211ENST00000568373 CYLC2Q14093 348 aaPredicted RBP18.02■□□□□ 0.48
SMPD3-211ENST00000568373 DGKKQ5KSL6 1271 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 PLPP4Q5VZY2 271 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 CHSY3Q70JA7 882 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 SHKBP1Q8TBC3 707 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 TMEM106CQ9BVX2 250 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 TNKS2Q9H2K2 1166 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 ZFYVE1Q9HBF4 777 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 STX18Q9P2W9 335 aaKnown RBP18.02■□□□□ 0.48
SMPD3-211ENST00000568373 IKZF3Q9UKT9 509 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 LZTS1Q9Y250 596 aa18.02■□□□□ 0.48
SMPD3-211ENST00000568373 PDE4DIPQ5VU43 2346 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 CXorf51AA0A1B0GTR3 108 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 CCDC189A1A4V9 331 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 SUPT3HB4E1H0 165 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 GPR39O43194 453 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 SUPT3HO75486 399 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 TSPAN12O95859 305 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 TSNQ15631 228 aaKnown RBP18.02■□□□□ 0.47
SMPD3-211ENST00000568373 ZRSR2Q15696 482 aaKnown RBP18.02■□□□□ 0.47
SMPD3-211ENST00000568373 CCDC6Q16204 474 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 CLEC6AQ6EIG7 209 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 SIDT2Q8NBJ9 832 aaKnown RBP18.02■□□□□ 0.47
SMPD3-211ENST00000568373 GIMAP7Q8NHV1 300 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 CD200R1Q8TD46 325 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.02■□□□□ 0.47
SMPD3-211ENST00000568373 FUBP1Q96AE4 644 aaKnown RBP18.02■□□□□ 0.47
SMPD3-211ENST00000568373 C19orf43Q9BQ61 176 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 P2RY12Q9H244 342 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 MRGBPQ9NV56 204 aa18.02■□□□□ 0.47
SMPD3-211ENST00000568373 C1orf232A0A0U1RR37 186 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 SYCE1LA8MT33 242 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 ECI2O75521 394 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 BMP1P13497 986 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 NUDT2P50583 147 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 EPHA5P54756 1037 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 SH3BP2P78314 561 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 TBL3Q12788 808 aaKnown RBP18.01■□□□□ 0.47
SMPD3-211ENST00000568373 PITRM1Q5JRX3 1037 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 CERS6Q6ZMG9 384 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 FBXO39Q8N4B4 442 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 PAF1Q8N7H5 531 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 OR2AP1Q8NGE2 309 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 SP7Q8TDD2 431 aaPredicted RBP18.01■□□□□ 0.47
SMPD3-211ENST00000568373 RPL10LQ96L21 214 aaKnown RBP18.01■□□□□ 0.47
SMPD3-211ENST00000568373 MYOFQ9NZM1 2061 aa18.01■□□□□ 0.47
SMPD3-211ENST00000568373 LRRC14BA6NHZ5 514 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 E5RI56 91 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 CDC7O00311 574 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 BTN3A1O00481 513 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 AIM2O14862 343 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 TBX10O75333 385 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 CDK14O94921 469 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 SRCP12931 536 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 CHRM3P20309 590 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 SERPINA4P29622 427 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 HLA-FP30511 346 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 CTNNB1P35222 781 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 GCKP35557 465 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 CTSOP43234 321 aaPredicted RBP18■□□□□ 0.47
SMPD3-211ENST00000568373 IL2P60568 153 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 SLC34A1Q06495 639 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 MYLK4Q86YV6 388 aaPredicted RBP18■□□□□ 0.47
SMPD3-211ENST00000568373 CLYBLQ8N0X4 340 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 KYQ8NBH2 561 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 GRIN3AQ8TCU5 1115 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 TCEAL4Q96EI5 215 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 ANKRD27Q96NW4 1050 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 RAD9AQ99638 391 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 SCN8AQ9UQD0 1980 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 NPEPPSL1A6NEC2 478 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 CAPN8A6NHC0 703 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 GAPDHSO14556 408 aaPredicted RBP18■□□□□ 0.47
SMPD3-211ENST00000568373 PRMT5O14744 637 aaPredicted RBP18■□□□□ 0.47
SMPD3-211ENST00000568373 CLASP2O75122 1294 aaKnown RBP18■□□□□ 0.47
SMPD3-211ENST00000568373 RFPL2O75678 378 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 PDE5AO76074 875 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 PRAMEF1O95521 474 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 FGF19O95750 216 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 FGF4P08620 206 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 DDX6P26196 483 aaKnown RBP eCLIP18■□□□□ 0.47
SMPD3-211ENST00000568373 HNF1BP35680 557 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 BMPR1AP36894 532 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 STK19P49842 368 aaPredicted RBP18■□□□□ 0.47
SMPD3-211ENST00000568373 CDKN3Q16667 212 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 UGT3A2Q3SY77 523 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 COL13A1Q5TAT6 717 aaPredicted RBP18■□□□□ 0.47
SMPD3-211ENST00000568373 FAM151BQ6UXP7 276 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 CYHR1Q6ZMK1 362 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 RIN3Q8TB24 985 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 DTX3LQ8TDB6 740 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms