RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 CRLS1Q9UJA2 301 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 FNDC3AQ9Y2H6 1198 aaKnown RBP13.71□□□□□ -0.21
TPM1-215ENST00000558868 MTCH2Q9Y6C9 303 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.22
TPM1-215ENST00000558868 OTOL1A6NHN0 477 aaPredicted RBP13.7□□□□□ -0.22
TPM1-215ENST00000558868 CCT8L1PA6NM43 557 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 E5RI56 91 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 DCTN3O75935 186 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 KAT7O95251 611 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 PRSS56P0CW18 603 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 CHRM1P11229 460 aaPredicted RBP13.7□□□□□ -0.22
TPM1-215ENST00000558868 TIMP2P16035 220 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 ATP5F1P24539 256 aaPredicted RBP13.7□□□□□ -0.22
TPM1-215ENST00000558868 SERPINB5P36952 375 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 GLRBP48167 497 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 ABCE1P61221 599 aaKnown RBP13.7□□□□□ -0.22
TPM1-215ENST00000558868 ATP6V0D1P61421 351 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 PTSQ03393 145 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 DLG1Q12959 904 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 ELAVL3Q14576 367 aaKnown RBP13.7□□□□□ -0.22
TPM1-215ENST00000558868 ZNF234Q14588 700 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 COL19A1Q14993 1142 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 SETDB1Q15047 1291 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 LRIT3Q3SXY7 679 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 SERPINA13PQ6UXR4 307 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 DPPA4Q7L190 304 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 TTC7BQ86TV6 843 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 TSPAN33Q86UF1 283 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 SERPINA9Q86WD7 417 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 SLC22A9Q8IVM8 553 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 GBP7Q8N8V2 638 aaPredicted RBP13.7□□□□□ -0.22
TPM1-215ENST00000558868 CSGALNACT1Q8TDX6 532 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 MYLIPQ8WY64 445 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 KCNJ9Q92806 393 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 P2RY12Q9H244 342 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 KDM4CQ9H3R0 1056 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 POMKQ9H5K3 350 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 NPHS2Q9NP85 383 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
TPM1-215ENST00000558868 XPR1Q9UBH6 696 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 TRMT6Q9UJA5 497 aaKnown RBP13.7□□□□□ -0.22
TPM1-215ENST00000558868 GNPTGQ9UJJ9 305 aa13.7□□□□□ -0.22
TPM1-215ENST00000558868 OAS3Q9Y6K5 1087 aaKnown RBP13.7□□□□□ -0.22
TPM1-215ENST00000558868 C16orf96A6NNT2 1141 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 TARM1B6A8C7 271 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 SMIM24O75264 130 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 ZNF37AP17032 561 aaPredicted RBP13.69□□□□□ -0.22
TPM1-215ENST00000558868 ITGB7P26010 798 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 ACRV1P26436 265 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 GMPRP36959 345 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 TNFRSF4P43489 277 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 SPINT3P49223 89 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 CDKN1CP49918 316 aaPredicted RBP13.69□□□□□ -0.22
TPM1-215ENST00000558868 DCDC1P59894 354 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 DNAJB13P59910 316 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 PFKPQ01813 784 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 DLX2Q07687 328 aaPredicted RBP13.69□□□□□ -0.22
TPM1-215ENST00000558868 CHRNA6Q15825 494 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 TECRLQ5HYJ1 363 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 C9orf64Q5T6V5 341 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 PTRHD1Q6GMV3 140 aaKnown RBP13.69□□□□□ -0.22
TPM1-215ENST00000558868 TRPM8Q7Z2W7 1104 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 WDR75Q8IWA0 830 aaKnown RBP13.69□□□□□ -0.22
TPM1-215ENST00000558868 TMEM151AQ8N4L1 468 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 OR6Y1Q8NGX8 325 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 RHEBL1Q8TAI7 183 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 BIRC8Q96P09 236 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 DERL2Q9GZP9 239 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 TMEM245Q9H330 911 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 TFB2MQ9H5Q4 396 aaKnown RBP13.69□□□□□ -0.22
TPM1-215ENST00000558868 PCDH12Q9NPG4 1184 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 GTSE1Q9NYZ3 720 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 THAP10Q9P2Z0 257 aaPredicted RBP13.69□□□□□ -0.22
TPM1-215ENST00000558868 NFKBIL1Q9UBC1 381 aaPredicted RBP13.69□□□□□ -0.22
TPM1-215ENST00000558868 CD207Q9UJ71 328 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 TMCO1Q9UM00 188 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 KIAA1549LQ6ZVL6 1849 aa13.69□□□□□ -0.22
TPM1-215ENST00000558868 ZNF106Q9H2Y7 1883 aaKnown RBP13.68□□□□□ -0.22
TPM1-215ENST00000558868 A0A0U1RQS6 177 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 AGAP14A8MT82 685 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 A8MX80 341 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 C1QTNF3-AMACRE9PGA6 284 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 TK2O00142 265 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 PSMD11O00231 422 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 KPNA3O00505 521 aaPredicted RBP13.68□□□□□ -0.22
TPM1-215ENST00000558868 GAPDHSO14556 408 aaPredicted RBP13.68□□□□□ -0.22
TPM1-215ENST00000558868 DNAJC6O75061 913 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 HSPA4LO95757 839 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 CTSLP07711 333 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 C1SP09871 688 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 CD1DP15813 335 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 TFEBP19484 476 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 CHRM3P20309 590 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 LHCGRP22888 699 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 SP100P23497 879 aaPredicted RBP13.68□□□□□ -0.22
TPM1-215ENST00000558868 HK2P52789 917 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 ARFIP2P53365 341 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 TIAL1Q01085 375 aaKnown RBP eCLIP13.68□□□□□ -0.22
TPM1-215ENST00000558868 CCDC15Q0P6D6 951 aa13.68□□□□□ -0.22
TPM1-215ENST00000558868 ELP6Q0PNE2 266 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms