RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	GAGE4	Q13068	117 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	FGFBP1	Q14512	234 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	DRAP1	Q14919	205 aa	Predicted RBP	5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	C2orf68	Q2NKX9	166 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	KIF19	Q2TAC6	998 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	HIST2H2BC	Q6DN03	193 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	HIST2H2BD	Q6DRA6	164 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	ANKRD54	Q6NXT1	300 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	WDR73	Q6P4I2	378 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	TSSK4	Q6SA08	328 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	PRSS57	Q6UWY2	283 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	QSOX2	Q6ZRP7	698 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	BHLHA9	Q7RTU4	235 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	C16orf82	Q7Z2V1	217 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	CPLX4	Q7Z7G2	160 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	RBM23	Q86U06	439 aa	Known RBP	5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	HAPLN4	Q86UW8	402 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	DIS3L2	Q8IYB7	885 aa	Known RBP	5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	LILRB1	Q8NHL6	650 aa	Predicted RBP	5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	RFFL	Q8WZ73	363 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	SCMH1	Q96GD3	660 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	C3orf30	Q96M34	536 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	SLITRK1	Q96PX8	696 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	CTAGE1	Q96RT6	745 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	RANBP17	Q9H2T7	1088 aa	Known RBP	5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	C17orf75	Q9HAS0	396 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	MKKS	Q9NPJ1	570 aa	Predicted RBP	5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	INTS6	Q9UL03	887 aa	Known RBP	5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	CAPN7	Q9Y6W3	813 aa		5.69	□□□□□ -1.5
LINC01088-208	ENST00000511895	SBNO1	A3KN83	1393 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	BCL9	O00512	1426 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	CASP8AP2	Q9UKL3	1982 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	CPED1	A4D0V7	1026 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	DLG1	Q12959	904 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	SNTA1	Q13424	505 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	CTF1	Q16619	201 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	TST	Q16762	297 aa	Known RBP	5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	ALG11	Q2TAA5	492 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	EIF2S3L	Q2VIR3	472 aa	Known RBP	5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	PAPPA-AS1	Q5QFB9	102 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	C9orf57	Q5W0N0	161 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	CRELD2	Q6UXH1	353 aa	Predicted RBP	5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	SLC36A4	Q6YBV0	504 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	TAOK1	Q7L7X3	1001 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	ARMC9	Q7Z3E5	817 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	ZNF114	Q8NC26	417 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	RND1	Q92730	232 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	NAP1L4	Q99733	375 aa	Known RBP	5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	HAUS8	Q9BT25	410 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	C1QTNF4	Q9BXJ3	329 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	IFIH1	Q9BYX4	1025 aa	Known RBP	5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	ESRP2	Q9H6T0	727 aa	Known RBP	5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	HINT3	Q9NQE9	182 aa	Known RBP	5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	ASAH2	Q9NR71	780 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	CEPT1	Q9Y6K0	416 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	TUBGCP6	Q96RT7	1819 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	CEP290	O15078	2479 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	FMN2	Q9NZ56	1722 aa		5.68	□□□□□ -1.5
LINC01088-208	ENST00000511895	DENND3	A2RUS2	1198 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	NPIPB15	A6NHN6	443 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	AKR1B15	C9JRZ8	316 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	EPB41L2	O43491	1005 aa	Known RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	AFP	P02771	609 aa	Known RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	IL7R	P16871	459 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	PAX3	P23760	479 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	PIP4K2A	P48426	406 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	COMP	P49747	757 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	METAP2	P50579	478 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	RPL7A	P62424	266 aa	Known RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	TMEM115	Q12893	351 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	FRG1	Q14331	258 aa	Known RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	CCNG2	Q16589	344 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	ATP13A5	Q4VNC0	1218 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	KLHL22	Q53GT1	634 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	GGNBP1	Q5YKI7	109 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	CCDC13	Q8IYE1	715 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	SPATA6L	Q8N4H0	392 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	ETNPPL	Q8TBG4	499 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	PSPC1	Q8WXF1	523 aa	Known RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	FAM122A	Q96E09	287 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	TTC7A	Q9ULT0	858 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	LRP12	Q9Y561	859 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	CACNA1G	O43497	2377 aa		5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	TRIP12	Q14669	1992 aa	Predicted RBP	5.67	□□□□□ -1.5
LINC01088-208	ENST00000511895	SAA2-SAA4	A0A096LPE2	208 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	SRRM3	A6NNA2	597 aa	Predicted RBP	5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	PLRG1	O43660	514 aa	Known RBP	5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	KDM4B	O94953	1096 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	MBD4	O95243	580 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	CLDN14	O95500	239 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	PPP1R3D	O95685	299 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	TBX18	O95935	607 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	TSPY4	P0CV99	314 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	TSPY10	P0CW01	314 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	ICAM3	P32942	547 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	OLR1	P78380	273 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	MPP1	Q00013	466 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	ECT2L	Q008S8	904 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	GOLGA8DP	Q0D2H9	430 aa		5.66	□□□□□ -1.5
LINC01088-208	ENST00000511895	TBCE	Q15813	527 aa	Predicted RBP	5.66	□□□□□ -1.5

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