RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TPD52L3Q96J77 140 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 HOPXQ9BPY8 73 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 MFSD1Q9H3U5 465 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 RNF186Q9NXI6 227 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 A0A0J9YYE9 177 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 H0YGN5 161 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 CACNB4O00305 520 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 EPHX1P07099 455 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 NSG1P42857 185 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 RPIAP49247 311 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 SLC7A2P52569 658 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 TRIM60Q495X7 471 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 FAM13CQ8NE31 585 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 KBTBD7Q8WVZ9 684 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 CXorf40BQ96DE9 158 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 RMND5BQ96G75 393 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 C1orf74Q96LT6 269 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 ABCG8Q9H221 673 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 PHPT1Q9NRX4 125 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 ENOPH1Q9UHY7 261 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 NFS1Q9Y697 457 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 BEST1O76090 585 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 S100A5P33763 92 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 ACVRL1P37023 503 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 DAB2P98082 770 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 ALDH6A1Q02252 535 aaKnown RBP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 CAPN13Q6MZZ7 669 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 UNC5BQ8IZJ1 945 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 ZNF276Q8N554 614 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 TWIST2Q8WVJ9 160 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 CDKN2AIPNLQ96HQ2 116 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 IPPKQ9H8X2 491 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 DNAJC11Q9NVH1 559 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 MIOSQ9NXC5 875 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 RGS17Q9UGC6 210 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 ZNF711Q9Y462 761 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 GPSM3Q9Y4H4 160 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 GOLGA4Q13439 2230 aaKnown RBP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 SERINC3Q13530 473 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 ZNF460Q14592 562 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 VWA5B1Q5TIE3 1220 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 CRTC3Q6UUV7 619 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 PHYKPLQ8IUZ5 450 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 B4GALNT2Q8NHY0 566 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 ZNF296Q8WUU4 475 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 POP5Q969H6 163 aaKnown RBP13.72□□□□□ -0.21
BRAT1-203ENST00000467558 SEMA6AQ9H2E6 1030 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 TMEM248Q9NWD8 314 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 FBXL21Q9UKT6 434 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 ARL5AQ9Y689 179 aa13.72□□□□□ -0.21
BRAT1-203ENST00000467558 FAM220BPB1ANY3 271 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 KIF1CO43896 1103 aaKnown RBP13.71□□□□□ -0.21
BRAT1-203ENST00000467558 TM7SF2O76062 418 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 PFKMP08237 780 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 ANPEPP15144 967 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 KELP23276 732 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 IL5RAQ01344 420 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 AP5B1Q2VPB7 878 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 GCNT7Q6ZNI0 430 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 CPNE9Q8IYJ1 553 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 CNTD1Q8N815 330 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 OR13C4Q8NGS5 318 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 FBXO30Q8TB52 745 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 IGSF21Q96ID5 467 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 KLHL32Q96NJ5 620 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 TSGA13Q96PP4 275 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 PRRG3Q9BZD7 231 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 USP29Q9HBJ7 922 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 ACSS2Q9NR19 701 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 C6orf203Q9P0P8 240 aaPredicted RBP13.71□□□□□ -0.21
BRAT1-203ENST00000467558 MAST2Q6P0Q8 1798 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 ENO4A6NNW6 628 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.71□□□□□ -0.21
BRAT1-203ENST00000467558 GSTM1P09488 218 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 HPGDP15428 266 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 RIPK1Q13546 671 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 TSNQ15631 228 aaKnown RBP13.71□□□□□ -0.21
BRAT1-203ENST00000467558 GPR33Q49SQ1 333 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 FBXW8Q8N3Y1 598 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 PAWRQ96IZ0 340 aaKnown RBP13.71□□□□□ -0.21
BRAT1-203ENST00000467558 NR1H4Q96RI1 486 aaPredicted RBP13.71□□□□□ -0.21
BRAT1-203ENST00000467558 SYT11Q9BT88 431 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 FAIM2Q9BWQ8 316 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 ARMC7Q9H6L4 198 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 MFHAS1Q9Y4C4 1052 aa13.71□□□□□ -0.21
BRAT1-203ENST00000467558 PER2O15055 1255 aa13.71□□□□□ -0.22
BRAT1-203ENST00000467558 APOA1P02647 267 aa13.71□□□□□ -0.22
BRAT1-203ENST00000467558 PABPC1P11940 636 aaKnown RBP13.71□□□□□ -0.22
BRAT1-203ENST00000467558 NTSP30990 170 aa13.71□□□□□ -0.22
BRAT1-203ENST00000467558 PITX1P78337 314 aaPredicted RBP13.71□□□□□ -0.22
BRAT1-203ENST00000467558 PRKD1Q15139 912 aaPredicted RBP13.71□□□□□ -0.22
BRAT1-203ENST00000467558 SIRPB2Q5JXA9 342 aa13.71□□□□□ -0.22
BRAT1-203ENST00000467558 PHC3Q8NDX5 983 aa13.71□□□□□ -0.22
BRAT1-203ENST00000467558 SETD9Q8NE22 299 aa13.71□□□□□ -0.22
BRAT1-203ENST00000467558 OR52E6Q96RD3 313 aa13.71□□□□□ -0.22
BRAT1-203ENST00000467558 CEP44Q9C0F1 390 aa13.71□□□□□ -0.22
BRAT1-203ENST00000467558 CDV3Q9UKY7 258 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms