RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ZBTB17Q13105 803 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 CHST15Q7LFX5 561 aaPredicted RBP20.87■□□□□ 0.93
VSX1-206ENST00000444511 PLD5Q8N7P1 536 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 CNTD1Q8N815 330 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 SLC37A2Q8TED4 501 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 SGF29Q96ES7 293 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 MED8Q96G25 268 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 AHCYL2Q96HN2 611 aaKnown RBP20.87■□□□□ 0.93
VSX1-206ENST00000444511 WDR24Q96S15 920 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 SLC38A3Q99624 504 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 PRKAB1Q9Y478 270 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 OAS3Q9Y6K5 1087 aaKnown RBP20.87■□□□□ 0.93
VSX1-206ENST00000444511 ARHGEF17Q96PE2 2063 aaPredicted RBP20.87■□□□□ 0.93
VSX1-206ENST00000444511 RGSL1A5PLK6 1076 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 ZNF487B1APH4 448 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 APOL1O14791 398 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 DNAJC6O75061 913 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 ARHGAP25P42331 645 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 FASLGP48023 281 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 GPLD1P80108 840 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 SRSF6Q13247 344 aaKnown RBP20.86■□□□□ 0.93
VSX1-206ENST00000444511 SQSTM1Q13501 440 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 GALNT3Q14435 633 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 ODF2Q5BJF6 829 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 HENMT1Q5T8I9 393 aaKnown RBP20.86■□□□□ 0.93
VSX1-206ENST00000444511 VASH2Q86V25 355 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 RHOT2Q8IXI1 618 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 SFRP1Q8N474 314 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 AGBL5Q8NDL9 886 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 CCDC112Q8NEF3 446 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 CCDC42Q96M95 316 aa20.86■□□□□ 0.93
VSX1-206ENST00000444511 CNOT6Q9ULM6 557 aaKnown RBP20.86■□□□□ 0.93
VSX1-206ENST00000444511 ATMQ13315 3056 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 SCN8AQ9UQD0 1980 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 FADS2P1A8MWK0 482 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 KRT1P04264 644 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 MPSTP25325 297 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 CSF2RBP32927 897 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 CSTF2P33240 577 aaKnown RBP eCLIP20.85■□□□□ 0.93
VSX1-206ENST00000444511 PDK1Q15118 436 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 SLC9A4Q6AI14 798 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 LYSMD3Q7Z3D4 306 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 VSIG1Q86XK7 387 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 ZNF761Q86XN6 746 aaPredicted RBP20.85■□□□□ 0.93
VSX1-206ENST00000444511 DTX1Q86Y01 620 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 ZSCAN1Q8NBB4 408 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 OR10G6Q8NH81 332 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 TAAR9Q96RI9 348 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 ANP32EQ9BTT0 268 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 CEP41Q9BYV8 373 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 STN1Q9H668 368 aaKnown RBP20.85■□□□□ 0.93
VSX1-206ENST00000444511 RMI1Q9H9A7 625 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 ABHD10Q9NUJ1 306 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 SPTLC3Q9NUV7 552 aa20.85■□□□□ 0.93
VSX1-206ENST00000444511 PCYT1BQ9Y5K3 369 aaPredicted RBP20.85■□□□□ 0.93
VSX1-206ENST00000444511 C3orf70A6NLC5 250 aaPredicted RBP20.84■□□□□ 0.93
VSX1-206ENST00000444511 STMND1H3BQB6 276 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 PPP1R12AO14974 1030 aaPredicted RBP20.84■□□□□ 0.93
VSX1-206ENST00000444511 EML2O95834 649 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 THRAP10827 490 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 FGF3P11487 239 aaPredicted RBP20.84■□□□□ 0.93
VSX1-206ENST00000444511 ACP5P13686 325 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 ZFXP17010 805 aaPredicted RBP20.84■□□□□ 0.93
VSX1-206ENST00000444511 HHEXQ03014 270 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 TMEM71Q6P5X7 295 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 KDELC2Q7Z4H8 507 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 RFX6Q8HWS3 928 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 AGAP3Q96P47 875 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 CHP1Q99653 195 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 NHEJ1Q9H9Q4 299 aaPredicted RBP20.84■□□□□ 0.93
VSX1-206ENST00000444511 ZFYVE1Q9HBF4 777 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 TMEM9Q9P0T7 183 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 TBC1D29Q9UFV1 150 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 KCNK6Q9Y257 313 aa20.84■□□□□ 0.93
VSX1-206ENST00000444511 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.83■□□□□ 0.93
VSX1-206ENST00000444511 DUX1O43812 170 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 SNX2O60749 519 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 ZNF569Q5MCW4 686 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.83■□□□□ 0.93
VSX1-206ENST00000444511 NPNTQ6UXI9 565 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 NT5DC3Q86UY8 548 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 VSTM4Q8IW00 320 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 ART4Q93070 314 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 RNF25Q96BH1 459 aaPredicted RBP20.83■□□□□ 0.93
VSX1-206ENST00000444511 IMP4Q96G21 291 aaKnown RBP20.83■□□□□ 0.93
VSX1-206ENST00000444511 ARHGAP9Q9BRR9 750 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 SPATA16Q9BXB7 569 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 SARS2Q9NP81 518 aaKnown RBP20.83■□□□□ 0.93
VSX1-206ENST00000444511 PCDHGA4Q9Y5G9 962 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 PCDHGA3Q9Y5H0 932 aa20.83■□□□□ 0.93
VSX1-206ENST00000444511 CFAP46Q8IYW2 2715 aa20.82■□□□□ 0.92
VSX1-206ENST00000444511 AHCTF1Q8WYP5 2266 aa20.82■□□□□ 0.92
VSX1-206ENST00000444511 B8ZZF3 427 aa20.82■□□□□ 0.92
VSX1-206ENST00000444511 GRID2O43424 1007 aa20.82■□□□□ 0.92
VSX1-206ENST00000444511 MFAP3LO75121 409 aa20.82■□□□□ 0.92
VSX1-206ENST00000444511 MTA2O94776 668 aa20.82■□□□□ 0.92
VSX1-206ENST00000444511 ZIC2O95409 532 aaPredicted RBP20.82■□□□□ 0.92
VSX1-206ENST00000444511 SLC4A1P02730 911 aa20.82■□□□□ 0.92
VSX1-206ENST00000444511 PIRTP0C851 137 aa20.82■□□□□ 0.92
VSX1-206ENST00000444511 TNNT1P13805 278 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms