RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 FKBP9P1Q75LS8 142 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 DCAF4L2Q8NA75 395 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 OR2AP1Q8NGE2 309 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 NAF1Q96HR8 494 aaKnown RBP13.96□□□□□ -0.17
SCAF4-202ENST00000399804 HEPHQ9BQS7 1158 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 CLSTN3Q9BQT9 956 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 FEM1AQ9BSK4 669 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 HAUS8Q9BT25 410 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 ZFP14Q9HCL3 533 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 TLR9Q9NR96 1032 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 ZNF212Q9UDV6 495 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 TDRKHQ9Y2W6 561 aaKnown RBP13.96□□□□□ -0.17
SCAF4-202ENST00000399804 ZCWPW2A0A1B0GU75 182 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 IFRD1O00458 451 aaPredicted RBP13.96□□□□□ -0.17
SCAF4-202ENST00000399804 RGS14O43566 566 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 SIX3O95343 332 aaPredicted RBP13.96□□□□□ -0.17
SCAF4-202ENST00000399804 PSMA4P25789 261 aaKnown RBP13.96□□□□□ -0.17
SCAF4-202ENST00000399804 POLE2P56282 527 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 PEX6Q13608 980 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 PCLAFQ15004 111 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 LHX8Q68G74 356 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 ZNF366Q8N895 744 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 OR8D1Q8WZ84 308 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 SUV39H2Q9H5I1 410 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 SLC12A4Q9UP95 1085 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 ACTL7AQ9Y615 435 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 ATAD5Q96QE3 1844 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 MGAT4DA6NG13 374 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 LEFTY2O00292 366 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 OTCP00480 354 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 HSPA1AP0DMV8 641 aaKnown RBP13.96□□□□□ -0.17
SCAF4-202ENST00000399804 HSPA1BP0DMV9 641 aaKnown RBP13.96□□□□□ -0.17
SCAF4-202ENST00000399804 IGFBP4P22692 258 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 DGKGP49619 791 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 PSME3P61289 254 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 ECT2LQ008S8 904 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 CAP1Q01518 475 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 DSG1Q02413 1049 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 GPM6BQ13491 265 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 NAIF1Q69YI7 327 aaPredicted RBP13.96□□□□□ -0.17
SCAF4-202ENST00000399804 NAPRTQ6XQN6 538 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 RINLQ6ZS11 566 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 C11orf96Q7Z7L8 435 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 CXorf40AQ8TE69 158 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 BADQ92934 168 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 HBEGFQ99075 208 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 RAD9AQ99638 391 aa13.96□□□□□ -0.17
SCAF4-202ENST00000399804 PAPSS2O95340 614 aaPredicted RBP13.96□□□□□ -0.18
SCAF4-202ENST00000399804 SEC24AO95486 1093 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 NFATC1O95644 943 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 MAPK1P28482 360 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 GCAP28676 217 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 CLCQ05315 142 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 SAMD4BQ5PRF9 694 aaKnown RBP13.96□□□□□ -0.18
SCAF4-202ENST00000399804 SLC8B1Q6J4K2 584 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 Q6ZVU0 165 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 RD3Q7Z3Z2 195 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 C2CD4AQ8NCU7 369 aaPredicted RBP13.96□□□□□ -0.18
SCAF4-202ENST00000399804 CSGALNACT1Q8TDX6 532 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 TOP1MTQ969P6 601 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 NPAS2Q99743 824 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 NMRK1Q9NWW6 199 aa13.96□□□□□ -0.18
SCAF4-202ENST00000399804 PNMA8BQ9ULN7 279 aaPredicted RBP13.96□□□□□ -0.18
SCAF4-202ENST00000399804 C1QTNF3-AMACRE9PGA6 284 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 KIF1CO43896 1103 aaKnown RBP13.95□□□□□ -0.18
SCAF4-202ENST00000399804 RFPL2O75678 378 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 ACADSP16219 412 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 ARSDP51689 593 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 TMEM198Q66K66 360 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 MBLAC2Q68D91 279 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 LRRC74BQ6ZQY2 392 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 CLEC4FQ8N1N0 589 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 SLC39A11Q8N1S5 342 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 CLDN19Q8N6F1 224 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 C19orf60Q96EN9 201 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 RAD18Q9NS91 495 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 SLC13A4Q9UKG4 626 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 TNFRSF10BO14763 440 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 KPNA5O15131 536 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 ALDH1A2O94788 518 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 CDK14O94921 469 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 CLDN7O95471 211 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 MCCD1P59942 119 aaPredicted RBP13.95□□□□□ -0.18
SCAF4-202ENST00000399804 PLEKHG6Q3KR16 790 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 SLC9B1Q4ZJI4 515 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 LY6G5CQ5SRR4 150 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 GK5Q6ZS86 529 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 FAM9CQ8IZT9 166 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 TOX2Q96NM4 488 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 CADM1Q9BY67 442 aaKnown RBP13.95□□□□□ -0.18
SCAF4-202ENST00000399804 MARCH5Q9NX47 278 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 C15orf41Q9Y2V0 281 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 OR2AG2A6NM03 316 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 TGM5O43548 720 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 CPSF4O95639 269 aaKnown RBP13.95□□□□□ -0.18
SCAF4-202ENST00000399804 FTH1P02794 183 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 HSPA7P48741 367 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 LBX1P52954 281 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 TMEM154Q6P9G4 183 aa13.95□□□□□ -0.18
SCAF4-202ENST00000399804 UBE2R2Q712K3 238 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms