RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 EHD1Q9H4M9 534 aa4.98□□□□□ -1.61
GABPB1-204ENST00000396464 KIF9Q9HAQ2 790 aa4.98□□□□□ -1.61
GABPB1-204ENST00000396464 FANCEQ9HB96 536 aa4.98□□□□□ -1.61
GABPB1-204ENST00000396464 RPRD1BQ9NQG5 326 aaKnown RBP4.98□□□□□ -1.61
GABPB1-204ENST00000396464 SLC22A11Q9NSA0 550 aa4.98□□□□□ -1.61
GABPB1-204ENST00000396464 PLK2Q9NYY3 685 aa4.98□□□□□ -1.61
GABPB1-204ENST00000396464 KIAA1456Q9P272 454 aa4.98□□□□□ -1.61
GABPB1-204ENST00000396464 PSME2Q9UL46 239 aa4.98□□□□□ -1.61
GABPB1-204ENST00000396464 SNX6Q9UNH7 406 aa4.98□□□□□ -1.61
GABPB1-204ENST00000396464 WBP11Q9Y2W2 641 aaKnown RBP4.98□□□□□ -1.61
GABPB1-204ENST00000396464 CMAHPQ9Y471 501 aa4.98□□□□□ -1.61
GABPB1-204ENST00000396464 DHX29Q7Z478 1369 aaKnown RBP4.98□□□□□ -1.61
GABPB1-204ENST00000396464 PNPLA7Q6ZV29 1317 aa4.98□□□□□ -1.61
GABPB1-204ENST00000396464 NCF1BA6NI72 391 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 NCF1CA8MVU1 366 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 F8WDY8 70 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 POLRMTO00411 1230 aaKnown RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 CYP27B1O15528 508 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 RNF113AO15541 343 aaKnown RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 HCRTR2O43614 444 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 NME6O75414 186 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 IL1AP01583 271 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 KRT6BP04259 564 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 RLN1P04808 185 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 SERPING1P05155 500 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 PCCBP05166 539 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 ENO1P06733 434 aaKnown RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 CSF1RP07333 972 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 VIMP08670 466 aaKnown RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 OR52Z1P0C646 297 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 RHOXF2BP0C7M4 288 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 C8orf89P0DMQ9 161 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 PSMA5P28066 241 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 POU1F1P28069 291 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 SLC16A2P36021 539 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 FRKP42685 505 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 GABRB2P47870 512 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 KRT6CP48668 564 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 CLK3P49761 638 aaKnown RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 GNAQP50148 359 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 ACY1Q03154 408 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 TLE3Q04726 772 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 RELQ04864 619 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 ACSM2AQ08AH3 577 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 CRHR2Q13324 411 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 CCNIQ14094 377 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 FGFBP1Q14512 234 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 IL13RA2Q14627 380 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 GRM7Q14831 915 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 EFTUD2Q15029 972 aaKnown RBP eCLIP4.97□□□□□ -1.611e-5■□□□□ 9
GABPB1-204ENST00000396464 HADHQ16836 314 aaKnown RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 PCGF3Q3KNV8 242 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 LRRC23Q53EV4 343 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 IFI44LQ53G44 452 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 TAF1BQ53T94 588 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 PRAMEF8Q5VWM4 474 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 ACSM2BQ68CK6 577 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 RAET1GQ6H3X3 334 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 GSTA5Q7RTV2 222 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 TIGD4Q8IY51 512 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 ZNF679Q8IYX0 411 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 SYNE4Q8N205 404 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 ARL14Q8N4G2 192 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 NIPA2Q8N8Q9 360 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 SPERTQ8NA61 448 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 PLA2G15Q8NCC3 412 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 CCNYQ8ND76 341 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 BEND2Q8NDZ0 799 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 OR2T34Q8NGX1 318 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 OR14K1Q8NGZ2 314 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 IL17DQ8TAD2 202 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 TBC1D15Q8TC07 691 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 ZNF483Q8TF39 744 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 GLMPQ8WWB7 406 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 IP6K1Q92551 441 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 RAPGEF5Q92565 580 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 CCDC51Q96ER9 411 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 PRICKLE1Q96MT3 831 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 EGFL8Q99944 293 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 RHOXF2Q9BQY4 288 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 RTN4RQ9BZR6 473 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 TFB2MQ9H5Q4 396 aaKnown RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 ANKZF1Q9H8Y5 726 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 AKIRIN1Q9H9L7 192 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 RANGRFQ9HD47 186 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 HPS4Q9NQG7 708 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 PAG1Q9NWQ8 432 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 FAM118AQ9NWS6 357 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 GDAP2Q9NXN4 497 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 MTMR4Q9NYA4 1195 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 IPO11Q9UI26 975 aaKnown RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 MAD2L2Q9UI95 211 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 MTUS1Q9ULD2 1270 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 NDRG4Q9ULP0 352 aaKnown RBP4.97□□□□□ -1.61
GABPB1-204ENST00000396464 SORCS3Q9UPU3 1222 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 PLEKHA6Q9Y2H5 1048 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 RAD54L2Q9Y4B4 1467 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 CFAP73A6NFT4 308 aa4.97□□□□□ -1.61
GABPB1-204ENST00000396464 YDJCA8MPS7 323 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms