RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 ATP13A5Q4VNC0 1218 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 AGBL4Q5VU57 503 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 ZNF776Q68DI1 518 aaPredicted RBP18.49■□□□□ 0.55
CLN3-206ENST00000360019 FAM45BPQ6NSW5 357 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 CERS6Q6ZMG9 384 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 CLEC14AQ86T13 490 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 PLD6Q8N2A8 252 aaKnown RBP18.49■□□□□ 0.55
CLN3-206ENST00000360019 FAM45AQ8TCE6 357 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLN3-206ENST00000360019 CENPTQ96BT3 561 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 CABS1Q96KC9 395 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 BIRC8Q96P09 236 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 FAM111AQ96PZ2 611 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 AARSD1Q9BTE6 412 aaKnown RBP18.49■□□□□ 0.55
CLN3-206ENST00000360019 SLC6A17Q9H1V8 727 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 NDRG2Q9UN36 371 aaKnown RBP18.49■□□□□ 0.55
CLN3-206ENST00000360019 VWA7Q9Y334 891 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 PLLPQ9Y342 182 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 MTF2Q9Y483 593 aaPredicted RBP18.49■□□□□ 0.55
CLN3-206ENST00000360019 FADS3Q9Y5Q0 445 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 PSMD11O00231 422 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 RRP9O43818 475 aaKnown RBP18.49■□□□□ 0.55
CLN3-206ENST00000360019 C5AR1P21730 350 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 ACRV1P26436 265 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 FMO4P31512 558 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 GNGT1P63211 74 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 GPR33Q49SQ1 333 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 LVRNQ6Q4G3 990 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 GDAP1Q8TB36 358 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 RAB7BQ96AH8 199 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 COQ10AQ96MF6 247 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 IQCGQ9H095 443 aaKnown RBP18.49■□□□□ 0.55
CLN3-206ENST00000360019 FAM83DQ9H4H8 585 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 ZNF358Q9NW07 568 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 NFKBIL1Q9UBC1 381 aaPredicted RBP18.49■□□□□ 0.55
CLN3-206ENST00000360019 CRLS1Q9UJA2 301 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 VPS9D1Q9Y2B5 631 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 MED16Q9Y2X0 877 aa18.49■□□□□ 0.55
CLN3-206ENST00000360019 PLXNA2O75051 1894 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 PFDN6O15212 129 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 GLRA3O75311 464 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 FDXRP22570 491 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 CRABP2P29373 138 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 PTGER3P43115 390 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 TAS2R38P59533 333 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 ILF2Q12905 390 aaKnown RBP18.48■□□□□ 0.55
CLN3-206ENST00000360019 ACOX1Q15067 660 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 TMEM52BQ4KMG9 183 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 CTSL3PQ5NE16 218 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 HENMT1Q5T8I9 393 aaKnown RBP18.48■□□□□ 0.55
CLN3-206ENST00000360019 PIM3Q86V86 326 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 NXPE1Q8N323 547 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 BOCQ9BWV1 1114 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 C1QTNF1Q9BXJ1 281 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 P2RY12Q9H244 342 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 FBRSQ9HAH7 460 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.48■□□□□ 0.55
CLN3-206ENST00000360019 TLK1Q9UKI8 766 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 TMPRSS11EQ9UL52 423 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 EMCNQ9ULC0 261 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 CA14Q9ULX7 337 aa18.48■□□□□ 0.55
CLN3-206ENST00000360019 MUC3AQ02505 3323 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 A0A1W2PP55 124 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 RGSL1A5PLK6 1076 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 MAN2B1O00754 1011 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 DNAJC6O75061 913 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 WISP3O95389 354 aaPredicted RBP18.47■□□□□ 0.55
CLN3-206ENST00000360019 DHRS4L1P0CG22 281 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 LSP1P33241 339 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 SLC12A2P55011 1212 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 ADARP55265 1226 aaKnown RBP18.47■□□□□ 0.55
CLN3-206ENST00000360019 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.47■□□□□ 0.55
CLN3-206ENST00000360019 TMPRSS6Q8IU80 811 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 CENPLQ8N0S6 344 aaPredicted RBP18.47■□□□□ 0.55
CLN3-206ENST00000360019 ZNF687Q8N1G0 1237 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 HDDC3Q8N4P3 179 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 PAIP2Q9BPZ3 127 aaKnown RBP18.47■□□□□ 0.55
CLN3-206ENST00000360019 SPATA16Q9BXB7 569 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 ABCG8Q9H221 673 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 DCDC2Q9UHG0 476 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 COQ6Q9Y2Z9 468 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 LRRK1Q38SD2 2015 aa18.47■□□□□ 0.55
CLN3-206ENST00000360019 NEMP1O14524 444 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 WNT9AO14904 365 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 MMP20O60882 483 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 C6P13671 934 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 ITGA9Q13797 1035 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 INSCQ1MX18 579 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 TAF1BQ53T94 588 aaPredicted RBP18.46■□□□□ 0.55
CLN3-206ENST00000360019 N4BP2L1Q5TBK1 243 aaPredicted RBP18.46■□□□□ 0.55
CLN3-206ENST00000360019 C16orf46Q6P387 395 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 TMEM92Q6UXU6 159 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 DTX3LQ8TDB6 740 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 NAT14Q8WUY8 206 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 DYDC1Q8WWB3 177 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 DTD2Q96FN9 168 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 TSPAN17Q96FV3 270 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 RIOK2Q9BVS4 552 aaKnown RBP18.46■□□□□ 0.55
CLN3-206ENST00000360019 CDH19Q9H159 772 aa18.46■□□□□ 0.55
CLN3-206ENST00000360019 ARHGEF3Q9NR81 526 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms