RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 KLF11O14901 512 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 CAPN15O75808 1086 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 FEN1P39748 380 aaKnown RBP17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 ACTR3P61158 418 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 PRKD1Q15139 912 aaPredicted RBP17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 ALFQ53S48 1182 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 ERICH5Q6P6B1 374 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 HEATR4Q86WZ0 1026 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 SPPL2CQ8IUH8 684 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 DENND6AQ8IWF6 608 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 TMEM192Q8IY95 271 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 DNAJB4Q9UDY4 337 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 GTF2A1LQ9UNN4 478 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 STYXL1Q9Y6J8 313 aa17.02■□□□□ 0.31
TRAPPC11-201ENST00000334690 CFHP08603 1231 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 TNNI3P19429 210 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLC6A2P23975 617 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 CLEC6AQ6EIG7 209 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 PLEKHG4BQ96PX9 1271 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 IPPKQ9H8X2 491 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 ZNF490Q9ULM2 529 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 LRATO95237 230 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 CDK9P50750 372 aaKnown RBP17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 MPPE1Q53F39 396 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 CACUL1Q86Y37 369 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 CLEC4CQ8WTT0 213 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 S100ZQ8WXG8 99 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 UPF1Q92900 1129 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 AZIN2Q96A70 460 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 DEPDC7Q96QD5 511 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 DNAJC11Q9NVH1 559 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 FAM53CQ9NYF3 392 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 SERPINB7O75635 380 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 ESR1P03372 595 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 ETS2P15036 469 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 TCF4P15884 667 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 SP100P23497 879 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 HCAR3P49019 387 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 AP1S1P61966 158 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 TAB1Q15750 504 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 ACSBG2Q5FVE4 666 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 IL23RQ5VWK5 629 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 RASAL3Q86YV0 1011 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 HIPK1Q86Z02 1210 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 OR6K2Q8NGY2 324 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLC47A1Q96FL8 570 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 BORCS6Q96GS4 357 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 DNAJC1Q96KC8 554 aaKnown RBP17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 ACSS2Q9NR19 701 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 GABRDO14764 452 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 NR2F1P10589 423 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 THOP1P52888 689 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 LIPEQ05469 1076 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 FIBCD1Q8N539 461 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 APOLD1Q96LR9 279 aa17.01■□□□□ 0.31
TRAPPC11-201ENST00000334690 IRAK2O43187 625 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 SPAM1P38567 509 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 GSTM5P46439 218 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 KCNJ11Q14654 390 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 HMCESQ96FZ2 354 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 CENPNQ96H22 339 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-201ENST00000334690 NUSAP1Q9BXS6 441 aaKnown RBP17■□□□□ 0.31
TRAPPC11-201ENST00000334690 EPB41L1Q9H4G0 881 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 PTPRJQ12913 1337 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 NRXN3Q9Y4C0 1643 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 GLTPD2A6NH11 291 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 FAM159BA6NKW6 160 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 H0YGN5 161 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 INSIG1O15503 277 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLC25A11Q02978 314 aaKnown RBP17■□□□□ 0.31
TRAPPC11-201ENST00000334690 ARHGAP1Q07960 439 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 CDCA2Q69YH5 1023 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-201ENST00000334690 SMYD5Q6GMV2 418 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 SMPD3Q9NY59 655 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-201ENST00000334690 ASF1AQ9Y294 204 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 NFS1Q9Y697 457 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 TEX264Q9Y6I9 313 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 COL14A1Q05707 1796 aaKnown RBP17■□□□□ 0.31
TRAPPC11-201ENST00000334690 TCRBV7S3A2A0A539 114 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 ELFN1P0C7U0 828 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 SELPP16109 830 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 ASMTP46597 345 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 SP2Q02086 613 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 CPTPQ5TA50 214 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 CHADLQ6NUI6 762 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 CLEC20AQ6ZU45 233 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 NEK10Q6ZWH5 1172 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 RELL1Q8IUW5 271 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 OR7D4Q8NG98 312 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 PSMG2Q969U7 264 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 LENG1Q96BZ8 264 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-201ENST00000334690 PPCDCQ96CD2 204 aa17■□□□□ 0.31
TRAPPC11-201ENST00000334690 IL1BP01584 269 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 PEX2P28328 305 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 PTGER3P43115 390 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 STX4Q12846 297 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 RALGPS1Q5JS13 557 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 RFWD3Q6PCD5 774 aa16.99■□□□□ 0.31
TRAPPC11-201ENST00000334690 ZNF655Q8N720 491 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms