RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 MTSS1O43312 755 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 GPR89BP0CG08 455 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 ALDH4A1P30038 563 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 MAGEA1P43355 309 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 DCDC1P59894 354 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 RHDQ02161 417 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 CDK18Q07002 472 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 CLN3Q13286 438 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 TRA2AQ13595 282 aaKnown RBP eCLIP17.6■□□□□ 0.41
HDDC3-201ENST00000330334 PRKD1Q15139 912 aaPredicted RBP17.6■□□□□ 0.41
HDDC3-201ENST00000330334 PDPK2PQ6A1A2 396 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 NPNTQ6UXI9 565 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 TMPRSS9Q7Z410 1059 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 TMC3Q7Z5M5 1100 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 TRIM74Q86UV6 250 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 TEKT5Q96M29 485 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 TRIM5Q9C035 493 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 GLOD4Q9HC38 313 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 AKAP7Q9P0M2 348 aaPredicted RBP17.6■□□□□ 0.41
HDDC3-201ENST00000330334 ZNHIT2Q9UHR6 403 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 PLEKHM1Q9Y4G2 1056 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 A0A0A6YYK5 440 aaPredicted RBP17.59■□□□□ 0.41
HDDC3-201ENST00000330334 FADS2P1A8MWK0 482 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 K7ENP7 123 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 HGSO14964 777 aaPredicted RBP17.59■□□□□ 0.41
HDDC3-201ENST00000330334 INPP4BO15327 924 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 ASMTLO95671 621 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 EPOP01588 193 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 NOP2P46087 812 aaKnown RBP17.59■□□□□ 0.41
HDDC3-201ENST00000330334 GPLD1P80108 840 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 BIRC2Q13490 618 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 MAP9Q49MG5 647 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 TFDP3Q5H9I0 405 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 CCDC70Q6NSX1 233 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 INO80CQ6PI98 192 aaPredicted RBP17.59■□□□□ 0.41
HDDC3-201ENST00000330334 ZNF574Q6ZN55 896 aaPredicted RBP17.59■□□□□ 0.41
HDDC3-201ENST00000330334 MARK2Q7KZI7 788 aaKnown RBP17.59■□□□□ 0.41
HDDC3-201ENST00000330334 LYSMD3Q7Z3D4 306 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 KATNAL2Q8IYT4 538 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 RCOR2Q8IZ40 523 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 SFRP1Q8N474 314 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 OR4D9Q8NGE8 314 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 TFB1MQ8WVM0 346 aaKnown RBP17.59■□□□□ 0.41
HDDC3-201ENST00000330334 PATE1Q8WXA2 126 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 SLC39A7Q92504 469 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 CALR3Q96L12 384 aaKnown RBP17.59■□□□□ 0.41
HDDC3-201ENST00000330334 ZSCAN5AQ9BUG6 496 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 CARD9Q9H257 536 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 SEMA6CQ9H3T2 930 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 CPNE5Q9HCH3 593 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 SEPT10Q9P0V9 454 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 HYOU1Q9Y4L1 999 aa17.59■□□□□ 0.41
HDDC3-201ENST00000330334 OAS3Q9Y6K5 1087 aaKnown RBP17.59■□□□□ 0.41
HDDC3-201ENST00000330334 IGHV1OR21-1A0A087WYE8 117 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 NUAK1O60285 661 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 CST8O60676 142 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 ZRANB2O95218 330 aaKnown RBP eCLIP17.58■□□□□ 0.4
HDDC3-201ENST00000330334 NDST3O95803 873 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 ATP1A1P05023 1023 aaKnown RBP17.58■□□□□ 0.4
HDDC3-201ENST00000330334 HGFP14210 728 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 PTPN3P26045 913 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 CLCNKAP51800 687 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 LIMK2P53671 638 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 DYNLT1P63172 113 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 GALNT3Q14435 633 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 AMZ1Q400G9 498 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 SPOCD1Q6ZMY3 1216 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 USP53Q70EK8 1073 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 CCNL2Q96S94 520 aaPredicted RBP17.58■□□□□ 0.4
HDDC3-201ENST00000330334 VAT1Q99536 393 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 CEP41Q9BYV8 373 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 RDH14Q9HBH5 336 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 TRIM39Q9HCM9 518 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 LUC7LQ9NQ29 371 aaKnown RBP17.58■□□□□ 0.4
HDDC3-201ENST00000330334 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.58■□□□□ 0.4
HDDC3-201ENST00000330334 PDP2Q9P2J9 529 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 PISDQ9UG56 409 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 PCDHA13Q9Y5I0 950 aa17.58■□□□□ 0.4
HDDC3-201ENST00000330334 IGHV5-10-1A0A0J9YXX1 117 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 TNNT1P13805 278 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 CD82P27701 267 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 WASHC5Q12768 1159 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 SPA17Q15506 151 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.57■□□□□ 0.4
HDDC3-201ENST00000330334 PHF19Q5T6S3 580 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 ARHGAP40Q5TG30 622 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 C11orf63Q6NUN7 778 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 IYDQ6PHW0 289 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 TRAM1L1Q8N609 369 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 GPR26Q8NDV2 337 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 SPATA22Q8NHS9 363 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 DTX3LQ8TDB6 740 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 P3H4Q92791 437 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 NUDT22Q9BRQ3 303 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 HERPUD2Q9BSE4 406 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 SARS2Q9NP81 518 aaKnown RBP17.57■□□□□ 0.4
HDDC3-201ENST00000330334 SAE1Q9UBE0 346 aaPredicted RBP17.57■□□□□ 0.4
HDDC3-201ENST00000330334 FAM153AQ9UHL3 310 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.57■□□□□ 0.4
HDDC3-201ENST00000330334 PCYT1BQ9Y5K3 369 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms