RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 EBF4Q9BQW3 602 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 HIPK3Q9H422 1215 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 M0QX08 132 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 FTH1P02794 183 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 PRKAR1AP10644 381 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 COL6A2P12110 1019 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 ITIH1P19827 911 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 CTSKP43235 329 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 MTAPQ13126 283 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 MYBPC3Q14896 1274 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 MOGQ16653 247 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 FSTL4Q6MZW2 842 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 RNF44Q7L0R7 432 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 ARRDC4Q8NCT1 418 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 PIH1D2Q8WWB5 315 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 CCL22O00626 93 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 OR6A2O95222 327 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 GRM5P41594 1212 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 AKIRIN2Q53H80 203 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 CENPSQ8N2Z9 138 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 IGSF9Q9P2J2 1179 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 ZNF232Q9UNY5 417 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 H0YGN5 161 aa16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 BNIP3Q12983 259 aa16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 BICRALQ6AI39 1079 aa16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 REP15Q6BDI9 236 aa16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 TRMT10BQ6PF06 316 aaKnown RBP16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 SLC4A11Q8NBS3 891 aa16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 MROH1Q8NDA8 1641 aa16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 RHOBTB2Q9BYZ6 727 aa16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 UNC93B1Q9H1C4 597 aa16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 COQ10BQ9H8M1 238 aa16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 NFS1Q9Y697 457 aa16.39■□□□□ 0.22
SH3RF1-201ENST00000284637 FBP2O00757 339 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 B4GALT4O60513 344 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 SLC6A2P23975 617 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 KLRC2P26717 231 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 MAPK9P45984 424 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 SLC18A1P54219 525 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PTPN5P54829 565 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 HERC3Q15034 1050 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 TCEA2Q15560 299 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PITRM1Q5JRX3 1037 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 ZYG11AQ6WRX3 759 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PYROXD2Q8N2H3 581 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 OR8H1Q8NGG4 311 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 AGO3Q9H9G7 860 aaKnown RBP16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 TMEM138Q9NPI0 162 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PDP1Q9P0J1 537 aaPredicted RBP16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 CORO2BQ9UQ03 480 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 A0A1W2PRG6 482 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 CCDC162PA2VCL2 907 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 TBL1XO60907 577 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PRKD3O94806 890 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 NR2F6P10588 404 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 ENTPD1P49961 510 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 SNRPD1P62314 119 aaKnown RBP16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 MADCAM1Q13477 382 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 BTG3Q14201 252 aaPredicted RBP16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PSMD5Q16401 504 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PMF1Q6P1K2 205 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 FRMD7Q6ZUT3 714 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 P2RY8Q86VZ1 359 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PIK3C3Q8NEB9 887 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 OR6K2Q8NGY2 324 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PLEKHO2Q8TD55 490 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 RNF38Q9H0F5 515 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 AJAP1Q9UKB5 411 aaPredicted RBP16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 MAPRE3Q9UPY8 281 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PTCH2Q9Y6C5 1203 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 BOLA2-SMG1P6H3BVE0 249 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 FANCGO15287 622 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PQBP1O60828 265 aaKnown RBP16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 ERAL1O75616 437 aaKnown RBP16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 THRBP10828 461 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 OLR1P78380 273 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 EIF2B5Q13144 721 aaKnown RBP16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 IL18R1Q13478 541 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 GNA13Q14344 377 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 TFAP2BQ92481 460 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 APOLD1Q96LR9 279 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 HBEGFQ99075 208 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 TINF2Q9BSI4 451 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 MRIQ9BWK5 157 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 ATP13A3Q9H7F0 1226 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 SIX2Q9NPC8 291 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 PSIP1O75475 530 aaKnown RBP16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 HLA-DQA2P01906 255 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 SNHG28P0DPA3 235 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 MAPKAPK2P49137 400 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 C9orf57Q5W0N0 161 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 MAP1SQ66K74 1059 aaPredicted RBP16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 TAPT1Q6NXT6 567 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 FAM131AQ6UXB0 335 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 ABHD15Q6UXT9 468 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 SPATA19Q7Z5L4 167 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 SPATA22Q8NHS9 363 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 UBE2E3Q969T4 207 aa16.39■□□□□ 0.21
SH3RF1-201ENST00000284637 FNDC11Q9BVV2 318 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms