RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZFYVE1Q9HBF4 777 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 RAD18Q9NS91 495 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 GOLGA6AQ9NYA3 693 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 PKD2L2Q9NZM6 624 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 TAAR2Q9P1P5 351 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 VPS18Q9P253 973 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 LRIT1Q9P2V4 623 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 IMPACTQ9P2X3 320 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 TRHDEQ9UKU6 1024 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 LHX6Q9UPM6 363 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 TMEM98Q9Y2Y6 226 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 REXO2Q9Y3B8 237 aaKnown RBP10.46□□□□□ -0.73
CCDC9-203ENST00000596938 PCDHGA8Q9Y5G5 932 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 ST14Q9Y5Y6 855 aa10.46□□□□□ -0.73
CCDC9-203ENST00000596938 GOLGA4Q13439 2230 aaKnown RBP10.46□□□□□ -0.74
CCDC9-203ENST00000596938 TP53BP1Q12888 1972 aaPredicted RBP10.45□□□□□ -0.74
CCDC9-203ENST00000596938 LOC285095A0A1B0GVY8 99 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 A0A1W2PQM1 296 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 ZW10O43264 779 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 NDST3O95803 873 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 MT-CYBP00156 380 aaPredicted RBP10.45□□□□□ -0.74
CCDC9-203ENST00000596938 CD68P34810 354 aaPredicted RBP10.45□□□□□ -0.74
CCDC9-203ENST00000596938 CTNNA1P35221 906 aaKnown RBP10.45□□□□□ -0.74
CCDC9-203ENST00000596938 MLLT3P42568 568 aaPredicted RBP10.45□□□□□ -0.74
CCDC9-203ENST00000596938 MARCKSL1P49006 195 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 GABREP78334 506 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 GALNT3Q14435 633 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 LLGL1Q15334 1064 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 COL28A1Q2UY09 1125 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 FAM182AQ5T1J6 154 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 LRRC69Q6ZNQ3 347 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 PID1Q7Z2X4 250 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 LYSMD3Q7Z3D4 306 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 CCDC50Q8IVM0 306 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 WDR36Q8NI36 951 aaKnown RBP10.45□□□□□ -0.74
CCDC9-203ENST00000596938 ZDHHC1Q8WTX9 485 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 HTR3CQ8WXA8 447 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 ATXN7L3BQ96GX2 97 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 PRR11Q96HE9 360 aaPredicted RBP10.45□□□□□ -0.74
CCDC9-203ENST00000596938 FCRL5Q96RD9 977 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 GFM1Q96RP9 751 aaKnown RBP10.45□□□□□ -0.74
CCDC9-203ENST00000596938 BAG1Q99933 345 aaPredicted RBP10.45□□□□□ -0.74
CCDC9-203ENST00000596938 HEMGNQ9BXL5 484 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 LACRTQ9GZZ8 138 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 RMI1Q9H9A7 625 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 NFKBIL1Q9UBC1 381 aaPredicted RBP10.45□□□□□ -0.74
CCDC9-203ENST00000596938 FAM153AQ9UHL3 310 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 RNF215Q9Y6U7 377 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 APC2O95996 2303 aa10.45□□□□□ -0.74
CCDC9-203ENST00000596938 CCDC187A0A096LP49 1063 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 A0A1W2PNU3 283 aaPredicted RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 CCDC66A2RUB6 948 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 FADS2P1A8MWK0 482 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 B4DGG1 531 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 APOC4-APOC2K7ER74 178 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 CASC3O15234 703 aaKnown RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 INPP4BO15327 924 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 B4GAT1O43505 415 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 DNAJC6O75061 913 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 ECEL1O95672 775 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 APOC2P02655 101 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 RPLP0P05388 317 aaKnown RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 CTNNA2P26232 953 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 AK4P27144 223 aaPredicted RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 RBMS1P29558 406 aaKnown RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 CDC25BP30305 580 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 CCKBRP32239 447 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 PTPN7P35236 360 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 CETN2P41208 172 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 GPR3P46089 330 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 VAV2P52735 878 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 PDX1P52945 283 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 NAP1L1P55209 391 aaKnown RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 RWDD2BP57060 319 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 DCDC1P59894 354 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 B4GALNT1Q00973 533 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 ZFP36L1Q07352 338 aaKnown RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 EIF3IQ13347 325 aaKnown RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 NR1D2Q14995 579 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 PCSK7Q16549 785 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 CLPPQ16740 277 aaPredicted RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 PDPK2PQ6A1A2 396 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 DOK6Q6PKX4 331 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 KDELC1Q6UW63 502 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 ZNF438Q7Z4V0 828 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 SPRED1Q7Z699 444 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 ZC3H18Q86VM9 953 aaKnown RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 GALNT13Q8IUC8 556 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 CCNJLQ8IV13 435 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 TMEM139Q8IV31 216 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 SFTPA2Q8IWL1 248 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 ZNF567Q8N184 647 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 ARL14Q8N4G2 192 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 LRRC57Q8N9N7 239 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 GPR26Q8NDV2 337 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 LIN37Q96GY3 246 aaPredicted RBP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 TMEM74Q96NL1 305 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
CCDC9-203ENST00000596938 QKIQ96PU8 341 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC9-203ENST00000596938 OR2M4Q96R27 311 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms