RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 NOMO1Q15155 1222 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 CDCP2Q5VXM1 449 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 NLRP8Q86W28 1048 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 SFTPA2Q8IWL1 248 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 SLC25A41Q8N5S1 370 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 UBL4BQ8N7F7 174 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 ALG3Q92685 438 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 CCDC74AQ96AQ1 378 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 TADA1Q96BN2 335 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 VAT1Q99536 393 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 FERMT1Q9BQL6 677 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 RSPH14Q9UHP6 348 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 ZNF711Q9Y462 761 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 RP1P56715 2156 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 CASC3O15234 703 aaKnown RBP16.53■□□□□ 0.24
SREBF1-219ENST00000580540 TJP3O95049 919 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 ATP1A1P05023 1023 aaKnown RBP16.53■□□□□ 0.24
SREBF1-219ENST00000580540 IVLP07476 585 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 GSDMDP57764 484 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 SLC14A2Q15849 920 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 DARS2Q6PI48 645 aaKnown RBP16.53■□□□□ 0.24
SREBF1-219ENST00000580540 SLC30A9Q6PML9 568 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 CACTIN-AS1Q8N1I8 211 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 Q8N9G6 341 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-219ENST00000580540 IPMKQ8NFU5 416 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 WDR24Q96S15 920 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 SPATA16Q9BXB7 569 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 MAGEE1Q9HCI5 957 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 SPATS2LQ9NUQ6 558 aaKnown RBP16.53■□□□□ 0.24
SREBF1-219ENST00000580540 TRNAU1APQ9NX07 287 aaKnown RBP16.53■□□□□ 0.24
SREBF1-219ENST00000580540 ZNHIT2Q9UHR6 403 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 TRHDEQ9UKU6 1024 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 SLC17A4Q9Y2C5 497 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 RAXQ9Y2V3 346 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 PLEKHM1Q9Y4G2 1056 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 ASPMQ8IZT6 3477 aa16.53■□□□□ 0.24
SREBF1-219ENST00000580540 RGSL1A5PLK6 1076 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 FADS2P1A8MWK0 482 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 USP12O75317 370 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 RBP3P10745 1247 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 ADCY8P40145 1251 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 CTBSQ01459 385 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 BIRC2Q13490 618 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 SPIDRQ14159 915 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 KDELC1Q6UW63 502 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 RBM44Q6ZP01 1051 aaKnown RBP16.52■□□□□ 0.24
SREBF1-219ENST00000580540 NRROSQ86YC3 692 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 GALNT13Q8IUC8 556 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 CDKL3Q8IVW4 592 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-219ENST00000580540 RAVER1Q8IY67 606 aaKnown RBP16.52■□□□□ 0.24
SREBF1-219ENST00000580540 GPR156Q8NFN8 814 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 GPBAR1Q8TDU6 330 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 ZDHHC1Q8WTX9 485 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 EID2BQ96D98 161 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 OXNAD1Q96HP4 312 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-219ENST00000580540 OR2M4Q96R27 311 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 FCRL5Q96RD9 977 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 NRSN2Q9GZP1 204 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 BPIFA1Q9NP55 256 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 ARFGAP3Q9NP61 516 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 TAAR2Q9P1P5 351 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 RABGEF1Q9UJ41 708 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 GUCA1BQ9UMX6 200 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 EFR3BQ9Y2G0 817 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 PRKAB1Q9Y478 270 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 SPO11Q9Y5K1 396 aa16.52■□□□□ 0.24
SREBF1-219ENST00000580540 GOLGA6L9A6NEM1 432 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 MIF4GDA9UHW6 222 aaKnown RBP16.51■□□□□ 0.23
SREBF1-219ENST00000580540 AURKAO14965 403 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 KCNN4O15554 427 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 NOBOXO60393 691 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 STK10O94804 968 aaKnown RBP16.51■□□□□ 0.23
SREBF1-219ENST00000580540 PTPN7P35236 360 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 ACTR1BP42025 376 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 CHRNA4P43681 627 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 ACTR1AP61163 376 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 CCL7P80098 99 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 ISXQ2M1V0 245 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 C14orf28Q4W4Y0 310 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 SIRPB2Q5JXA9 342 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 HENMT1Q5T8I9 393 aaKnown RBP16.51■□□□□ 0.23
SREBF1-219ENST00000580540 ITPRIPL1Q6GPH6 555 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 OGFOD3Q6PK18 319 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 TMC3Q7Z5M5 1100 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 GPR26Q8NDV2 337 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 OR6C4Q8NGE1 309 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 COX14Q96I36 57 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 MRGPRX2Q96LB1 330 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 DCBLD2Q96PD2 775 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 SRPK1Q96SB4 655 aaKnown RBP16.51■□□□□ 0.23
SREBF1-219ENST00000580540 FSD1LQ9BXM9 530 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 CDH19Q9H159 772 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 RAD18Q9NS91 495 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 CNOT6Q9ULM6 557 aaKnown RBP16.51■□□□□ 0.23
SREBF1-219ENST00000580540 ADGRG1Q9Y653 693 aa16.51■□□□□ 0.23
SREBF1-219ENST00000580540 OAS3Q9Y6K5 1087 aaKnown RBP16.51■□□□□ 0.23
SREBF1-219ENST00000580540 KMT2BQ9UMN6 2715 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-219ENST00000580540 ACACAQ13085 2346 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 LOC285095A0A1B0GVY8 99 aa16.5■□□□□ 0.23
SREBF1-219ENST00000580540 BRINP1O60477 761 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms