RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PYCR3Q53H96 274 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 TEX44Q53QW1 395 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 SLC30A9Q6PML9 568 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 IGF2-ASQ6U949 168 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 LYSMD3Q7Z3D4 306 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 TMPRSS9Q7Z410 1059 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 KDELC2Q7Z4H8 507 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 NT5DC3Q86UY8 548 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 RAVER1Q8IY67 606 aaKnown RBP14.57□□□□□ -0.08
FANCA-220ENST00000566409 CCDC170Q8IYT3 715 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 KATNAL2Q8IYT4 538 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 LSMEM2Q8N112 164 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 OR6C4Q8NGE1 309 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 PATE1Q8WXA2 126 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 KRT35Q92764 455 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 MRFAP1L1Q96HT8 127 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 ZNF578Q96N58 590 aaPredicted RBP14.57□□□□□ -0.08
FANCA-220ENST00000566409 GFM1Q96RP9 751 aaKnown RBP14.57□□□□□ -0.08
FANCA-220ENST00000566409 MLPHQ9BV36 600 aaPredicted RBP14.57□□□□□ -0.08
FANCA-220ENST00000566409 GSDMCQ9BYG8 508 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 FOXP3Q9BZS1 431 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 SYNDIG1Q9H7V2 258 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 LRIT1Q9P2V4 623 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 ATXN7L1Q9ULK2 861 aaPredicted RBP14.57□□□□□ -0.08
FANCA-220ENST00000566409 REXO2Q9Y3B8 237 aaKnown RBP14.57□□□□□ -0.08
FANCA-220ENST00000566409 DUSP10Q9Y6W6 482 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 hCG_1818297A0A087WSY0 165 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 A0A0A6YYK5 440 aaPredicted RBP14.56□□□□□ -0.08
FANCA-220ENST00000566409 D6RAR5 112 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 INPP4BO15327 924 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 B4GAT1O43505 415 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 NUDT21O43809 227 aaKnown RBP14.56□□□□□ -0.08
FANCA-220ENST00000566409 ECEL1O95672 775 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 PIRTP0C851 137 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 PNLIPP16233 465 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 CD68P34810 354 aaPredicted RBP14.56□□□□□ -0.08
FANCA-220ENST00000566409 NR2C2P49116 596 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 ERVPABLB-1P60509 514 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 B4GALNT1Q00973 533 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 TLE3Q04726 772 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 ILF3Q12906 894 aaKnown RBP eCLIP14.56□□□□□ -0.08
FANCA-220ENST00000566409 HENMT1Q5T8I9 393 aaKnown RBP14.56□□□□□ -0.08
FANCA-220ENST00000566409 KAZNQ674X7 775 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 C11orf63Q6NUN7 778 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 MARK2Q7KZI7 788 aaKnown RBP14.56□□□□□ -0.08
FANCA-220ENST00000566409 SPRED1Q7Z699 444 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 CCNJLQ8IV13 435 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 SPACA3Q8IXA5 215 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 NAGSQ8N159 534 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 ARL14Q8N4G2 192 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 EXD1Q8NHP7 514 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 ZDHHC1Q8WTX9 485 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 TEKT5Q96M29 485 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 PANX2Q96RD6 677 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 HERPUD2Q9BSE4 406 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 ADGRE3Q9BY15 652 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 FAM83DQ9H4H8 585 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 GLOD4Q9HC38 313 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 DNPEPQ9ULA0 475 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 PCDHGA8Q9Y5G5 932 aa14.56□□□□□ -0.08
FANCA-220ENST00000566409 EPN1Q9Y6I3 576 aaPredicted RBP14.56□□□□□ -0.08
FANCA-220ENST00000566409 CDRT15L2A8MXV6 281 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 RRP8O43159 456 aaKnown RBP14.55□□□□□ -0.08
FANCA-220ENST00000566409 DNAJC6O75061 913 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 ZRANB2O95218 330 aaKnown RBP eCLIP14.55□□□□□ -0.08
FANCA-220ENST00000566409 NDUFA10O95299 355 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 ATP1A1P05023 1023 aaKnown RBP14.55□□□□□ -0.08
FANCA-220ENST00000566409 CDK18Q07002 472 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 TFDP2Q14188 446 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 SPA17Q15506 151 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 PCSK7Q16549 785 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 SOWAHCQ53LP3 525 aaPredicted RBP14.55□□□□□ -0.08
FANCA-220ENST00000566409 ODF2Q5BJF6 829 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 TFDP3Q5H9I0 405 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 FOXR1Q6PIV2 292 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 RAD9BQ6WBX8 426 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 LRRC69Q6ZNQ3 347 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 ZNF438Q7Z4V0 828 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 RCOR2Q8IZ40 523 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 GPR26Q8NDV2 337 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 WDR36Q8NI36 951 aaKnown RBP14.55□□□□□ -0.08
FANCA-220ENST00000566409 KIAA1524Q8TCG1 905 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 LIN37Q96GY3 246 aaPredicted RBP14.55□□□□□ -0.08
FANCA-220ENST00000566409 NAF1Q96HR8 494 aaKnown RBP14.55□□□□□ -0.08
FANCA-220ENST00000566409 BBC3Q96PG8 261 aaPredicted RBP14.55□□□□□ -0.08
FANCA-220ENST00000566409 OR2M4Q96R27 311 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 LACRTQ9GZZ8 138 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 PRORYQ9H606 182 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 UBP1Q9NZI7 540 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 SHOC2Q9UQ13 582 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 PRKAB1Q9Y478 270 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 SPO11Q9Y5K1 396 aa14.55□□□□□ -0.08
FANCA-220ENST00000566409 CCDC187A0A096LP49 1063 aa14.54□□□□□ -0.08
FANCA-220ENST00000566409 RGSL1A5PLK6 1076 aa14.54□□□□□ -0.08
FANCA-220ENST00000566409 AURKAO14965 403 aa14.54□□□□□ -0.08
FANCA-220ENST00000566409 PPM1DO15297 605 aa14.54□□□□□ -0.08
FANCA-220ENST00000566409 PMPCBO75439 489 aa14.54□□□□□ -0.08
FANCA-220ENST00000566409 EML2O95834 649 aa14.54□□□□□ -0.08
FANCA-220ENST00000566409 PYGLP06737 847 aa14.54□□□□□ -0.08
FANCA-220ENST00000566409 CCKBRP32239 447 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms