RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 GOLGA6AQ9NYA3 693 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 SIRPGQ9P1W8 387 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 SPASTQ9UBP0 616 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 FAM153AQ9UHL3 310 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 RSPH14Q9UHP6 348 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 RABGEF1Q9UJ41 708 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 AAR2Q9Y312 384 aaKnown RBP15.65■□□□□ 0.1
USB1-208ENST00000563207 PPIL1Q9Y3C6 166 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 BAHCC1Q9P281 2608 aa15.64■□□□□ 0.1
USB1-208ENST00000563207 ZNF185O15231 689 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 EPOP01588 193 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 GP1BAP07359 652 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 NFKB1P19838 968 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 TNNT3P45378 269 aaPredicted RBP15.64■□□□□ 0.09
USB1-208ENST00000563207 ATRXP46100 2492 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 YPEL5P62699 121 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 PPARDQ03181 441 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 TRAF2Q12933 501 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 PTK2BQ14289 1009 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 NR0B2Q15466 257 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 ISXQ2M1V0 245 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 PARP6Q2NL67 630 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 TBC1D25Q3MII6 688 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 ENPP7Q6UWV6 458 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 ARHGEF18Q6ZSZ5 1173 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 CREG2Q8IUH2 290 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 ATL2Q8NHH9 583 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 PDCD6IPQ8WUM4 868 aaKnown RBP15.64■□□□□ 0.09
USB1-208ENST00000563207 C16orf45Q96MC5 204 aaPredicted RBP15.64■□□□□ 0.09
USB1-208ENST00000563207 DEPDC7Q96QD5 511 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 RBM15Q96T37 977 aaKnown RBP eCLIP15.64■□□□□ 0.09
USB1-208ENST00000563207 APOOQ9BUR5 198 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 C10orf88Q9H8K7 445 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 PCDH9Q9HC56 1237 aa15.64■□□□□ 0.09
USB1-208ENST00000563207 MRPL40Q9NQ50 206 aaKnown RBP15.64■□□□□ 0.09
USB1-208ENST00000563207 ATMQ13315 3056 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 A0A0U1RQS6 177 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 LMO7DNF2Z398 122 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 TPP1O14773 563 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 PSMD3O43242 534 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 LZTS3O60299 673 aaPredicted RBP15.63■□□□□ 0.09
USB1-208ENST00000563207 CPP00450 1065 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 DUSP3P51452 185 aaPredicted RBP15.63■□□□□ 0.09
USB1-208ENST00000563207 PDX1P52945 283 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 GEMP55040 296 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 SNX1Q13596 522 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 C3orf38Q5JPI3 329 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 C6orf132Q5T0Z8 1188 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 CCDC70Q6NSX1 233 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 LIPIQ6XZB0 460 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 USP45Q70EL2 814 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 SPACA3Q8IXA5 215 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.63■□□□□ 0.09
USB1-208ENST00000563207 CCDC89Q8N998 374 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 KYQ8NBH2 561 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 CCDC110Q8TBZ0 833 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 BTN2A2Q8WVV5 523 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 PIH1D2Q8WWB5 315 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 MAGOHBQ96A72 148 aaKnown RBP15.63■□□□□ 0.09
USB1-208ENST00000563207 SCRN2Q96FV2 425 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 PDXPQ96GD0 296 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 SMIM14Q96QK8 99 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 SRPK1Q96SB4 655 aaKnown RBP15.63■□□□□ 0.09
USB1-208ENST00000563207 LGR4Q9BXB1 951 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 SLC13A1Q9BZW2 595 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 ASCL3Q9NQ33 180 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 PAK5Q9P286 719 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 GULP1Q9UBP9 304 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 SATB2Q9UPW6 733 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 ENTPD2Q9Y5L3 495 aa15.63■□□□□ 0.09
USB1-208ENST00000563207 TMEM202A6NGA9 273 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 FANCGO15287 622 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 PHF2O75151 1096 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 RECQL5O94762 991 aaPredicted RBP15.62■□□□□ 0.09
USB1-208ENST00000563207 PRLP01236 227 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 ANXA6P08133 673 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 CYP2A6P11509 494 aaPredicted RBP15.62■□□□□ 0.09
USB1-208ENST00000563207 FNTAP49354 379 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 HK3P52790 923 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 EPHB1P54762 984 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 GDF10P55107 478 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 SRP54P61011 504 aaKnown RBP15.62■□□□□ 0.09
USB1-208ENST00000563207 TLE3Q04726 772 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 CDK18Q07002 472 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 IHHQ14623 411 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 NFATC4Q14934 902 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 FAM182AQ5T1J6 154 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 FOXR1Q6PIV2 292 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 LRRC69Q6ZNQ3 347 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 GSTA5Q7RTV2 222 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 KLHDC8BQ8IXV7 354 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 RAVER1Q8IY67 606 aaKnown RBP15.62■□□□□ 0.09
USB1-208ENST00000563207 SPATA22Q8NHS9 363 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 GRK7Q8WTQ7 553 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 OR1E3Q8WZA6 343 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 PRR11Q96HE9 360 aaPredicted RBP15.62■□□□□ 0.09
USB1-208ENST00000563207 HIC2Q96JB3 615 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 RUNDC3BQ96NL0 473 aa15.62■□□□□ 0.09
USB1-208ENST00000563207 MCCC1Q96RQ3 725 aaPredicted RBP15.62■□□□□ 0.09
USB1-208ENST00000563207 CCDC3Q9BQI4 270 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms