RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	ERVPABLB-1	P60509	514 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	GABRE	P78334	506 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	TLE3	Q04726	772 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	CDK18	Q07002	472 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	C1orf61	Q13536	156 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	COL9A2	Q14055	689 aa	Predicted RBP	12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	INPP5A	Q14642	412 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ELOC	Q15369	112 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ZNF569	Q5MCW4	686 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	FAXC	Q5TGI0	409 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	RAET1G	Q6H3X3	334 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	RBM44	Q6ZP01	1051 aa	Known RBP	12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ZNF662	Q6ZS27	426 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ARHGEF18	Q6ZSZ5	1173 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	SLC25A41	Q8N5S1	370 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ARL10	Q8N8L6	244 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ATL2	Q8NHH9	583 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	CCDC110	Q8TBZ0	833 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	PIH1D2	Q8WWB5	315 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ATG4A	Q8WYN0	398 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	SCRN2	Q96FV2	425 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	WDR92	Q96MX6	357 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	UBL7	Q96S82	380 aa	Predicted RBP	12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ABCG4	Q9H172	646 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	FAM153A	Q9UHL3	310 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	TRHDE	Q9UKU6	1024 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	DNPEP	Q9ULA0	475 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	R3HDM2	Q9Y2K5	976 aa	Known RBP	12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ENTPD2	Q9Y5L3	495 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	SCN8A	Q9UQD0	1980 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	CACNB4	O00305	520 aa	Predicted RBP	12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	NTN3	O00634	580 aa	Predicted RBP	12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	KIF5C	O60282	957 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	FZD6	O60353	706 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	CLDN7	O95471	211 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	MPO	P05164	745 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	MSN	P26038	577 aa	Known RBP	12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	PSMB4	P28070	264 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	HTR1B	P28222	390 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	CD68	P34810	354 aa	Predicted RBP	12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	TRIM23	P36406	574 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	MLLT3	P42568	568 aa	Predicted RBP	12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	CCDC173	Q0VFZ6	552 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	SNX1	Q13596	522 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	QPCT	Q16769	361 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	KCTD16	Q68DU8	428 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	ESRP1	Q6NXG1	681 aa	Known RBP	12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	CRTC1	Q6UUV9	634 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	RD3	Q7Z3Z2	195 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	HSD11B1L	Q7Z5J1	315 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	SPACA3	Q8IXA5	215 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	FAM71D	Q8N9W8	422 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	KY	Q8NBH2	561 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	PLA2G15	Q8NCC3	412 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	ZNF248	Q8NDW4	579 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	CCHCR1	Q8TD31	782 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	C1orf54	Q8WWF1	131 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	LRRC45	Q96CN5	670 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	PDXP	Q96GD0	296 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	TMEM121	Q9BTD3	319 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	FICD	Q9BVA6	458 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	GPR63	Q9BZJ6	419 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	GBA3	Q9H227	469 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	WDR26	Q9H7D7	661 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	KL	Q9UEF7	1012 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	SHOC2	Q9UQ13	582 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	SSUH2	Q9Y2M2	353 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	PCDHGA8	Q9Y5G5	932 aa		12.67	□□□□□ -0.38
FDPS-204	ENST00000461507	TNFRSF10C	O14798	259 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	IFNB1	P01574	187 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	ZNF30	P17039	623 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	GPR1	P46091	355 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	GEM	P55040	296 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	WNT3A	P56704	352 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	SRP54	P61011	504 aa	Known RBP	12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	RPL26	P61254	145 aa	Known RBP	12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	IHH	Q14623	411 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	LONRF2	Q1L5Z9	754 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	ANKRD20A2	Q5SQ80	823 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	ANKRD20A1	Q5TYW2	823 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	ANKRD20A3	Q5VUR7	823 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	ALS2CL	Q60I27	953 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	DOK6	Q6PKX4	331 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	ENPP7	Q6UWV6	458 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	NYAP1	Q6ZVC0	841 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507		Q6ZVL8	140 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	LYSMD3	Q7Z3D4	306 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	HID1	Q8IV36	788 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	CBARP	Q8N350	705 aa	Predicted RBP	12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	SLC35F6	Q8N357	371 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	LSM14A	Q8ND56	463 aa	Known RBP	12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	TSACC	Q96A04	125 aa	Predicted RBP	12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	FUBP1	Q96AE4	644 aa	Known RBP	12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	AP2M1	Q96CW1	435 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	DTD2	Q96FN9	168 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	PRR11	Q96HE9	360 aa	Predicted RBP	12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	PDLIM2	Q96JY6	352 aa		12.66	□□□□□ -0.38
FDPS-204	ENST00000461507	COQ10A	Q96MF6	247 aa		12.66	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms