RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 DPTQ07507 201 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 C6orf15Q6UXA7 325 aaPredicted RBP17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 ADAMTSL4Q6UY14 1074 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 TP53INP2Q8IXH6 220 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 KCTD5Q9NXV2 234 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 GOLGA6AQ9NYA3 693 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 TBC1D29Q9UFV1 150 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 WIPF3A6NGB9 483 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 ARHGAP42A6NI28 874 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 SIGLEC16A6NMB1 481 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 PSMD11O00231 422 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 GFPT2O94808 682 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 PPM1FP49593 454 aaPredicted RBP17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 ZNF143P52747 638 aaPredicted RBP17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 AIF1P55008 147 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 GFERP55789 205 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 RPL7AP62424 266 aaKnown RBP17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 SLC10A7Q0GE19 358 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 SEMA5AQ13591 1074 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 RFTN1Q14699 578 aaPredicted RBP17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 CA9Q16790 459 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 PRR30Q53SZ7 412 aaPredicted RBP17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 IYDQ6PHW0 289 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 MAMDC2Q7Z304 686 aaPredicted RBP17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 PGBD5Q8N414 524 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 PAF1Q8N7H5 531 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 C3orf20Q8ND61 904 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 MCCC1Q96RQ3 725 aaPredicted RBP17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 AGAP2Q99490 1192 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 SELENOOQ9BVL4 669 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 TBC1D10AQ9BXI6 508 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 ABCG8Q9H221 673 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 OGFRQ9NZT2 677 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 KIAA1468Q9P260 1216 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 RCOR3Q9P2K3 495 aaPredicted RBP17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 CD84Q9UIB8 345 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 PRKAB1Q9Y478 270 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 PCDHGA6Q9Y5G7 932 aa17.05■□□□□ 0.32
UBE2D4-209ENST00000454428 TCP11X1B4DZS4 312 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 KATNA1O75449 491 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 CREG1O75629 220 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 DDAH2O95865 285 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 PEX11BO96011 259 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 CPP00450 1065 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 MAPK9P45984 424 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 GPR1P46091 355 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 EPHA4P54764 986 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 SH3BP2P78314 561 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 OGDHQ02218 1023 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 IL10RBQ08334 325 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 TRAF2Q12933 501 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 MRPL49Q13405 166 aaKnown RBP17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 LRP8Q14114 963 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 EIF2S3LQ2VIR3 472 aaKnown RBP17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 PPP1R15BQ5SWA1 713 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 SCAMP4Q969E2 229 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 TCTN2Q96GX1 697 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 COX14Q96I36 57 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 SMIM14Q96QK8 99 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 TUBGCP2Q9BSJ2 902 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 TWSG1Q9GZX9 223 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 GANQ9H2C0 597 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 SP110Q9HB58 689 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 MLXIPLQ9NP71 852 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 CASS4Q9NQ75 786 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 ADAM22Q9P0K1 906 aa17.04■□□□□ 0.32
UBE2D4-209ENST00000454428 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 GOLGA6L3A6NEY3 463 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 DNAJC6O75061 913 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 SOCS5O75159 536 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 GADD45BO75293 160 aaPredicted RBP17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 C9P02748 559 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 HTR7P34969 479 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 FOXM1Q08050 763 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 LBRQ14739 615 aaKnown RBP17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 HSP90AA4PQ58FG1 418 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 CPZQ66K79 652 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 PHF13Q86YI8 300 aaPredicted RBP17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 GALNT13Q8IUC8 556 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 PDCD6IPQ8WUM4 868 aaKnown RBP17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 SCRN2Q96FV2 425 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 C9orf72Q96LT7 481 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 MCEEQ96PE7 176 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 RUFY1Q96T51 708 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 NOD2Q9HC29 1040 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 PHTF1Q9UMS5 762 aa17.03■□□□□ 0.32
UBE2D4-209ENST00000454428 APCP25054 2843 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 PIPSLA2A3N6 862 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 DFFAO00273 331 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 KIAA0754O94854 1291 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 RECKO95980 971 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 CYP2A6P11509 494 aaPredicted RBP17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 JAM2P57087 298 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 MON1BQ7L1V2 547 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 LYSMD3Q7Z3D4 306 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 AP2M1Q96CW1 435 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 STAMBPL1Q96FJ0 436 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 CNPY3Q9BT09 278 aa17.02■□□□□ 0.32
UBE2D4-209ENST00000454428 VPS16Q9H269 839 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms