RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 ZNF140P52738 457 aaPredicted RBP11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 ELAVL3Q14576 367 aaKnown RBP11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 SKIDA1Q1XH10 827 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 C9orf64Q5T6V5 341 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 TRMT10BQ6PF06 316 aaKnown RBP11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 USP45Q70EL2 814 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 TAOK1Q7L7X3 1001 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 GALNT7Q86SF2 657 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 DSG4Q86SJ6 1040 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 KCNMB4Q86W47 210 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 RASSF3Q86WH2 238 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 SYT12Q8IV01 421 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 KRT222Q8N1A0 295 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 PPM1NQ8N819 430 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 CHST14Q8NCH0 376 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 TMIEQ8NEW7 156 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 OR13J1Q8NGT2 312 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 CALML6Q8TD86 181 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 OR8D1Q8WZ84 308 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 MS4A3Q96HJ5 214 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 SGSM3Q96HU1 749 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 ZNF778Q96MU6 729 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 MCCC1Q96RQ3 725 aaPredicted RBP11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 FAM167BQ9BTA0 163 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 NLE1Q9NVX2 485 aaPredicted RBP11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 SENP1Q9P0U3 644 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 ZFATQ9P243 1243 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 ZNF711Q9Y462 761 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 SPO11Q9Y5K1 396 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 CELSR3Q9NYQ7 3312 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 IQANK1A0A1B0GTG1 560 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 H3BQF6 201 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 H7C0S8 307 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 BNIP3LO60238 219 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 LEFTY1O75610 366 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 UGT2B4P06133 528 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 LPOP22079 712 aaPredicted RBP11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ARNTP27540 789 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 GKP32189 559 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 HMGCLP35914 325 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 HADHAP40939 763 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 IL12RB1P42701 662 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 KIR2DL1P43626 348 aaPredicted RBP11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 SLCO1A2P46721 670 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ARCN1P48444 511 aaKnown RBP11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 CSE1LP55060 971 aaKnown RBP11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 EFTUD2Q15029 972 aaKnown RBP eCLIP11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ZNF423Q2M1K9 1284 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 HSF5Q4G112 596 aaPredicted RBP11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 TTMPQ5BVD1 217 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ZNF805Q5CZA5 627 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 LGSNQ5TDP6 509 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 EGFLAMQ63HQ2 1017 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ESRP1Q6NXG1 681 aaKnown RBP11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 SLC23A3Q6PIS1 610 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 CES3Q6UWW8 571 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 KIAA0408Q6ZU52 694 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 TRMT11Q7Z4G4 463 aaKnown RBP11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 CTAGE3PQ8IX95 158 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 TTC30BQ8N4P2 665 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 DCAKDQ8WVC6 231 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ARL8AQ96BM9 186 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 TLCD1Q96CP7 247 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 MTBPQ96DY7 904 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 SCRN2Q96FV2 425 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 CPNE1Q99829 537 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 FBRSQ9HAH7 460 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ZDHHC4Q9NPG8 344 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 SMYD2Q9NRG4 433 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 C20orf96Q9NUD7 363 aaPredicted RBP11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 OGFRQ9NZT2 677 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 HCN2Q9UL51 889 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ACTL7BQ9Y614 415 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ARL5AQ9Y689 179 aa11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ZNF106Q9H2Y7 1883 aaKnown RBP11.71□□□□□ -0.53
AC009404.1-202ENST00000439955 ATG2BQ96BY7 2078 aa11.71□□□□□ -0.54
AC009404.1-202ENST00000439955 BPTFQ12830 3046 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 SMIM23A6NLE4 172 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 CXorf49A8MYA2 514 aaPredicted RBP11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 UPK3BL1B0FP48 263 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 UPK3BL2E5RIL1 263 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 C1QTNF3-AMACRE9PGA6 284 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 K7EQS6 105 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 SH3BP5O60239 455 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 FAM155BO75949 473 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 KRT38O76015 456 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 VAPBO95292 243 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 PRKCGP05129 697 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 CTSLP07711 333 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 ERVK-10P10266 1014 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 CYP2A6P11509 494 aaPredicted RBP11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 CD59P13987 128 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 ZNF30P17039 623 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 ITGB7P26010 798 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 SLC8A1P32418 973 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 GP5P40197 560 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 P2RY2P41231 377 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 PRAMEP78395 509 aa11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 MRPS21P82921 87 aaKnown RBP11.7□□□□□ -0.54
AC009404.1-202ENST00000439955 DNAJC3Q13217 504 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms