RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 NPEPPSL1A6NEC2 478 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 GDF10P55107 478 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 PSME3P61289 254 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 FOXD4Q12950 439 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-208ENST00000430669 RAVER1Q8IY67 606 aaKnown RBP11.5□□□□□ -0.57
PTCH1-208ENST00000430669 RMND5BQ96G75 393 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-208ENST00000430669 KLHL20Q9Y2M5 609 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SBF1O95248 1867 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 PDE9AO76083 593 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 CLDN9O95484 217 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 DSC2Q02487 901 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SCAPQ12770 1279 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SPATS1Q496A3 300 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 C1orf220Q5T0J3 134 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 TRIM40Q6P9F5 258 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SAPCD2Q86UD0 394 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 ALYREFQ86V81 257 aaKnown RBP11.5□□□□□ -0.57
PTCH1-208ENST00000430669 ZNF276Q8N554 614 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SCAMP5Q8TAC9 235 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 COLEC10Q9Y6Z7 277 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 PIPSLA2A3N6 862 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 ABLIM1O14639 778 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 LIN7AO14910 233 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-208ENST00000430669 KRT8P05787 483 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 ALDH9A1P49189 494 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 RPL26P61254 145 aaKnown RBP11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SERINC3Q13530 473 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SLC1A5Q15758 541 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SH3PXD2AQ5TCZ1 1133 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 FOXR1Q6PIV2 292 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 ZNF621Q6ZSS3 439 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 CMC1Q7Z7K0 106 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 DHDDSQ86SQ9 333 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 EXOC2Q96KP1 924 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 ZCWPW1Q9H0M4 648 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 ERVW-1Q9UQF0 538 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 NR2E1Q9Y466 385 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 PCM1Q15154 2024 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 KLF11O14901 512 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 GOT2P00505 430 aaKnown RBP11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SLC35G4P0C7Q5 338 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 RGS1Q08116 209 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 TSNQ15631 228 aaKnown RBP11.5□□□□□ -0.57
PTCH1-208ENST00000430669 B4GALNT2Q8NHY0 566 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 OSBPL11Q9BXB4 747 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 RHOBTB2Q9BYZ6 727 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 IGFLR1Q9H665 355 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 REEP1Q9H902 201 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 DEC1Q9P2X7 70 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 ZNF232Q9UNY5 417 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 BRAT1Q6PJG6 821 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 ZNF514Q96K75 400 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 MRPS26Q9BYN8 205 aaKnown RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 MPP1Q00013 466 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 ZC3H12BQ5HYM0 836 aaKnown RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 PGAM4Q8N0Y7 254 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 DCAKDQ8WVC6 231 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 KLHL5Q96PQ7 755 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 TWNKQ96RR1 684 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 CXorf56Q9H5V9 222 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 RPS6KB2Q9UBS0 482 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 PLIN3O60664 434 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 SOCS5O75159 536 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 CNMDO75829 334 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 WDR47O94967 919 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 GSNP06396 782 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 OR4Q2P0C623 313 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 UMPSP11172 480 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 CTPS1P17812 591 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 HERVK_113P63132 956 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 CBX2Q14781 532 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 UBE2R2Q712K3 238 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 RERGQ96A58 199 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 ERVK-6Q9BXR3 956 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 MIOSQ9NXC5 875 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 ANGPT4Q9Y264 503 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 HEBP2Q9Y5Z4 205 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 CCL5P13501 91 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 PFKLP17858 780 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 PTDSS1P48651 473 aaKnown RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 DLG1Q12959 904 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 GPR33Q49SQ1 333 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 CDK20Q8IZL9 346 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 RNF145Q96MT1 663 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 FAM47E-STBD1D6RA91 191 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 EPHA3P29320 983 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 LPIN1Q14693 890 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 CAPN13Q6MZZ7 669 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 GLB1L3Q8NCI6 653 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 DBF4BQ8NFT6 615 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 TSGA13Q96PP4 275 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 NR1H4Q96RI1 486 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 AGAP2Q99490 1192 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 TFB2MQ9H5Q4 396 aaKnown RBP11.49□□□□□ -0.57
PTCH1-208ENST00000430669 ZNHIT2Q9UHR6 403 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 PIKFYVEQ9Y2I7 2098 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 PDZK1P1A8MUH7 402 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 TPST1O60507 370 aa11.49□□□□□ -0.57
PTCH1-208ENST00000430669 FAM155BO75949 473 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms