RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NPLQ9BXD5 320 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 TWSG1Q9GZX9 223 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 TMEM51Q9NW97 253 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 HDAC6Q9UBN7 1215 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 CLDN16Q9Y5I7 305 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 TTC28Q96AY4 2481 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 NCOR1O75376 2440 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 DYTNA2CJ06 578 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 SLC25A17O43808 307 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 IGKV5-2P06315 115 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 SNRNP70P08621 437 aaKnown RBP5□□□□□ -1.61
HMGB3P5-201ENST00000428894 CD72P21854 359 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 MCCP23508 829 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 DCTDP32321 178 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 ADD2P35612 726 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 CAPSQ13938 189 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 MORC3Q14149 939 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 LPIN1Q14693 890 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 SF3B4Q15427 424 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB3P5-201ENST00000428894 CCDC57Q2TAC2 916 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 ZNF718Q3SXZ3 478 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 ZNF672Q499Z4 452 aaPredicted RBP5□□□□□ -1.61
HMGB3P5-201ENST00000428894 FBXO43Q4G163 708 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 CAVIN4Q5BKX8 364 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 CBWD5Q5RIA9 395 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 GJB7Q6PEY0 223 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 LDHAL6AQ6ZMR3 332 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 ZNF329Q86UD4 541 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 ZBTB8BQ8NAP8 495 aaPredicted RBP5□□□□□ -1.61
HMGB3P5-201ENST00000428894 MCPH1Q8NEM0 835 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 FAM151AQ8WW52 585 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 NR4A3Q92570 626 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 SLC39A13Q96H72 371 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 CDX2Q99626 313 aaPredicted RBP5□□□□□ -1.61
HMGB3P5-201ENST00000428894 CHMP4BQ9H444 224 aaKnown RBP5□□□□□ -1.61
HMGB3P5-201ENST00000428894 KIF17Q9P2E2 1029 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 DERAQ9Y315 318 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 RPAP1Q9BWH6 1393 aaPredicted RBP5□□□□□ -1.61
HMGB3P5-201ENST00000428894 CDH23Q9H251 3354 aa5□□□□□ -1.61
HMGB3P5-201ENST00000428894 CACNA1FO60840 1977 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 STX16-NPEPL1H3BU86 382 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 SNAP23O00161 211 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 STX16O14662 325 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 GRID2O43424 1007 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 SERPINC1P01008 464 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 DAOP14920 347 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 FOSL2P15408 326 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 CTPS1P17812 591 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 HNF1BP35680 557 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 RPL3P39023 403 aaKnown RBP4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 SLC18A2Q05940 514 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 FAM27E3Q08E93 113 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 GCKRQ14397 625 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 TUBB8Q3ZCM7 444 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 DCAF6Q58WW2 860 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 GFI1BQ5VTD9 330 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 WBP2NLQ6ICG8 309 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 NAPEPLDQ6IQ20 393 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 ANKRD44Q8N8A2 993 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 AFG1LQ8WV93 481 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 THAP4Q8WY91 577 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 RNFT2Q96EX2 444 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 ADGRG7Q96K78 797 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 MPHOSPH6Q99547 160 aaKnown RBP4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 CD207Q9UJ71 328 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 CNPY2Q9Y2B0 182 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 ZHX2Q9Y6X8 837 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 MORC2Q9Y6X9 1032 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 DDX60LQ5H9U9 1706 aaKnown RBP4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 MYO9BQ13459 2157 aa4.99□□□□□ -1.61
HMGB3P5-201ENST00000428894 IGLV5-37A0A075B6J1 123 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 A0A0U1RQJ8 604 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 ZNF853P0CG23 659 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 CHKAP35790 457 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 PEX5P50542 639 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 ARSFP54793 590 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 ST3GAL1Q11201 340 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 MYBPHQ13203 477 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 POSTNQ15063 836 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 APOBEC3HQ6NTF7 200 aaKnown RBP4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 CERS3Q8IU89 383 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 SCYL3Q8IZE3 742 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 SAMD3Q8N6K7 520 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 ANKRD13CQ8N6S4 541 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 DNAAF1Q8NEP3 725 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 TRAPPC12Q8WVT3 735 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 ANP32BQ92688 251 aaKnown RBP4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 SECISBP2LQ93073 1101 aaKnown RBP4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 RNF183Q96D59 192 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 FAM167BQ9BTA0 163 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 C1QTNF1Q9BXJ1 281 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 GAREM1Q9H706 876 aa4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 TTC12Q9H892 705 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 LRRFIP2Q9Y608 721 aaKnown RBP4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 COL2A1P02458 1487 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P5-201ENST00000428894 TIMM23O14925 209 aa4.97□□□□□ -1.61
HMGB3P5-201ENST00000428894 DHX16O60231 1041 aaKnown RBP4.97□□□□□ -1.61
HMGB3P5-201ENST00000428894 KRT36O76013 467 aa4.97□□□□□ -1.61
HMGB3P5-201ENST00000428894 CH25HO95992 272 aa4.97□□□□□ -1.61
HMGB3P5-201ENST00000428894 ADAP00813 363 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms