RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 OR51M1Q9H341 326 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 EBF3Q9H4W6 596 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TFB2MQ9H5Q4 396 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CCDC86Q9H6F5 360 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 OPA3Q9H6K4 179 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CXorf21Q9HAI6 301 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SLC35C2Q9NQQ7 365 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CHST12Q9NRB3 414 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 RBM12Q9NTZ6 932 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 OR6C2Q9NZP2 312 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 VPS54Q9P1Q0 977 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ACTR3BQ9P1U1 418 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 RCOR3Q9P2K3 495 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DPP7Q9UHL4 492 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SLC24A2Q9UI40 661 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ENPP5Q9UJA9 477 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DCTN4Q9UJW0 460 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 VPS28Q9UK41 221 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MAN1B1Q9UKM7 699 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 AMFRQ9UKV5 643 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ERVK-19Q9WJR5 959 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CHKBQ9Y259 395 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CRYL1Q9Y2S2 319 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 GDAQ9Y2T3 454 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NEU2Q9Y3R4 380 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TRAF6Q9Y4K3 522 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 GMPPBQ9Y5P6 360 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SLC12A7Q9Y666 1083 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ARHGEF5Q12774 1597 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PLCH2O75038 1416 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TUBGCP6Q96RT7 1819 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 WNK3Q9BYP7 1800 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TMEM191CA6NGB0 347 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 LRRC53A6NM62 1247 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ZNF729A6NN14 1252 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 WASH4PA8MWX3 477 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 H3BSA7 217 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 K7ERQ8 282 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 EYA2O00167 538 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SH2B2O14492 632 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PPEF2O14830 753 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SLC30A4O14863 429 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ATP2A1O14983 1001 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DAPK3O43293 454 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DNAJA2O60884 412 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 AVILO75366 819 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 STX11O75558 287 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 RBBP9O75884 186 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 KRT36O76013 467 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NADKO95544 446 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 IFNA10P01566 189 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ANXA5P08758 320 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 QDPRP09417 244 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 LTA4HP09960 611 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TMEM191BP0C7N4 346 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 T-ENOLP0DO92 83 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SRGNP10124 158 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 BRAFP15056 766 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TAC1P20366 129 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 WARSP23381 471 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 BMI1P35226 326 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 HMGCLP35914 325 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ACVRL1P37023 503 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NUP62P37198 522 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PRKCIP41743 596 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MAPK9P45984 424 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 SLC15A1P46059 708 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ALDH1A3P47895 512 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TM4SF4P48230 202 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FNTBP49356 437 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MAN2A2P49641 1150 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 RGS6P49758 472 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MEOX2P50222 304 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FXR1P51114 621 aaKnown RBP eCLIP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CLCN4P51793 760 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TKTL1P51854 596 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ATXN1P54253 815 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 HSPA2P54652 639 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 EPHB1P54762 984 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PRMT2P55345 433 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PTENP60484 403 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PSMC6P62333 389 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 POU6F2P78424 691 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MRPS22P82650 360 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 RBP5P82980 135 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CNTN2Q02246 1040 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 GAD2Q05329 585 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CDH17Q12864 832 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 DLG1Q12959 904 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PAK1Q13153 545 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PLD1Q13393 1074 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TNK1Q13470 666 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 FGL2Q14314 439 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 ARHGAP19Q14CB8 494 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 PRKD1Q15139 912 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 KRT31Q15323 416 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TRIP10Q15642 601 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 GRK1Q15835 563 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 KNOP1Q1ED39 458 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CLEC16AQ2KHT3 1053 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms