RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 RDH11Q8TC12 318 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 WFIKKN2Q8TEU8 576 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 ESAMQ96AP7 390 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 NBNO60934 754 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 VPS4BO75351 444 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 ASLP04424 464 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 SLC1A2P43004 574 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 KIAA0930Q6ICG6 404 aaPredicted RBP13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 CYP2R1Q6VVX0 501 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 ZNF438Q7Z4V0 828 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 CLYBLQ8N0X4 340 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 KRT78Q8N1N4 520 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 HDDC3Q8N4P3 179 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 HEXDCQ8WVB3 486 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 FIG4Q92562 907 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 SLCO2A1Q92959 643 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 TBCDQ9BTW9 1192 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 WDR55Q9H6Y2 383 aaPredicted RBP13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 TMEM216Q9P0N5 145 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 BACE2Q9Y5Z0 518 aa13.07□□□□□ -0.32
PTPRN2-202ENST00000389416 EDF1O60869 148 aaKnown RBP13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 COX7A2P14406 83 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 DRD4P21917 467 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 PRKG2Q13237 762 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 DMC1Q14565 340 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 TAF1AQ15573 450 aaPredicted RBP13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 CYP4X1Q8N118 509 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 ZNF555Q8NEP9 628 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 COL26A1Q96A83 441 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 SLC2A13Q96QE2 648 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 KCTD14Q9BQ13 255 aaPredicted RBP13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 DYRK3O43781 588 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 IPO13O94829 963 aaKnown RBP13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 FSBPO95073 299 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 MPSTP25325 297 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 DDX6P26196 483 aaKnown RBP eCLIP13.06□□□□□ -0.329e-7■■■■■ 131.8
PTPRN2-202ENST00000389416 NAPRTQ6XQN6 538 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 LYSMD3Q7Z3D4 306 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 BTBD10Q9BSF8 475 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 PSMD13Q9UNM6 376 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 TRAF6Q9Y4K3 522 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 M0QZQ0 153 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 CYP7B1O75881 506 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 SIRPB2Q5JXA9 342 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 TXNDC11Q6PKC3 985 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 ZBTB2Q8N680 514 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 ZNF180Q9UJW8 692 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 FAF1Q9UNN5 650 aaPredicted RBP13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 SLC27A6Q9Y2P4 619 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 ZNF711Q9Y462 761 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 AGPSO00116 658 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 MTX2O75431 263 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 RASSF9O75901 435 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 VAV1P15498 845 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 NAE1Q13564 534 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 TMEM220Q6QAJ8 160 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 GDPD4Q6W3E5 623 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 CUZD1Q86UP6 607 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 DNAJC9Q8WXX5 260 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 IGSF8Q969P0 613 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 CDKN2AIPNLQ96HQ2 116 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 CACNA2D2Q9NY47 1150 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 MRPS17Q9Y2R5 130 aaKnown RBP13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 A0A1B0GUL6 1792 aa13.06□□□□□ -0.32
PTPRN2-202ENST00000389416 TGM5O43548 720 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 COL6A2P12110 1019 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 HPGDP15428 266 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 CXCR2P25025 360 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 GKP32189 559 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 RPIAP49247 311 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 MSS51Q4VC12 460 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 CHST15Q7LFX5 561 aaPredicted RBP13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 KLHDC9Q8NEP7 349 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 INPP5DQ92835 1189 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 CLP1Q92989 425 aaKnown RBP13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 UBE2E3Q969T4 207 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 TCF12Q99081 682 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 CCDC134Q9H6E4 229 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 GULP1Q9UBP9 304 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 TIMM22Q9Y584 194 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 CNTRLQ7Z7A1 2325 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 CYP11A1P05108 521 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 HLA-EP13747 358 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 PRKAG1P54619 331 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 NTHL1P78549 312 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 TSNQ15631 228 aaKnown RBP13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 CEP68Q76N32 757 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 BEND7Q8N7W2 519 aaPredicted RBP13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 NSMCE2Q96MF7 247 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 HBEGFQ99075 208 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 TMEM248Q9NWD8 314 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 PLIN3O60664 434 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 ATP6V1B2P21281 511 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 NEK3P51956 506 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 WDR5P61964 334 aaKnown RBP13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 CYP20A1Q6UW02 462 aa13.05□□□□□ -0.32
PTPRN2-202ENST00000389416 PLEKHA8Q96JA3 519 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms