RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SFTPA2Q8IWL1 248 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.65■□□□□ 0.42
HDDC3-201ENST00000330334 Q8N9G6 341 aaPredicted RBP17.65■□□□□ 0.42
HDDC3-201ENST00000330334 RNF214Q8ND24 703 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 LPCAT1Q8NF37 534 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 LRRN4Q8WUT4 740 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 PTCD2Q8WV60 388 aaKnown RBP17.65■□□□□ 0.42
HDDC3-201ENST00000330334 TADA1Q96BN2 335 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 IMP4Q96G21 291 aaKnown RBP17.65■□□□□ 0.42
HDDC3-201ENST00000330334 RIOK2Q9BVS4 552 aaKnown RBP17.65■□□□□ 0.42
HDDC3-201ENST00000330334 VPS18Q9P253 973 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 ACSL6Q9UKU0 697 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 UNC13CQ8NB66 2214 aa17.64■□□□□ 0.42
HDDC3-201ENST00000330334 ARHGEF17Q96PE2 2063 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-201ENST00000330334 PPP1R12AO14974 1030 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-201ENST00000330334 KLK10O43240 276 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 B4GAT1O43505 415 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 AK4P27144 223 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-201ENST00000330334 UGT1A5P35504 534 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 ZBTB17Q13105 803 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 HENMT1Q5T8I9 393 aaKnown RBP17.64■□□□□ 0.41
HDDC3-201ENST00000330334 CCHCR1Q8TD31 782 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 NAF1Q96HR8 494 aaKnown RBP17.64■□□□□ 0.41
HDDC3-201ENST00000330334 OR2M4Q96R27 311 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 TRIB3Q96RU7 358 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 WDR24Q96S15 920 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 AGAP2Q99490 1192 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 FOXP3Q9BZS1 431 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 SLC25A51Q9H1U9 297 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 FAM83DQ9H4H8 585 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 EPB41L5Q9HCM4 733 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 CNOT6Q9ULM6 557 aaKnown RBP17.64■□□□□ 0.41
HDDC3-201ENST00000330334 TMEM98Q9Y2Y6 226 aa17.64■□□□□ 0.41
HDDC3-201ENST00000330334 C1orf232A0A0U1RR37 186 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 PMS2P1A4D2B8 440 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 RHPN2P1A8MT19 583 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 ATXN7O15265 892 aaPredicted RBP17.63■□□□□ 0.41
HDDC3-201ENST00000330334 NVLO15381 856 aaKnown RBP17.63■□□□□ 0.41
HDDC3-201ENST00000330334 LCA5LO95447 670 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 ECEL1O95672 775 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 CPNE6O95741 557 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 COMTP21964 271 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 MAZP56270 477 aaKnown RBP17.63■□□□□ 0.41
HDDC3-201ENST00000330334 AP1B1Q10567 949 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 ODF2Q5BJF6 829 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 SLC30A9Q6PML9 568 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 NT5DC3Q86UY8 548 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 PIM3Q86V86 326 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 SLITRK4Q8IW52 837 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 NAGSQ8N159 534 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 CMKLR1Q99788 373 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 B3GNT4Q9C0J1 378 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 RMI1Q9H9A7 625 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 MAGEE1Q9HCI5 957 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 PKD2L2Q9NZM6 624 aa17.63■□□□□ 0.41
HDDC3-201ENST00000330334 KIF26BQ2KJY2 2108 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 PSTPIP1O43586 416 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 KRT1P04264 644 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 ACTR1BP42025 376 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 CDKN2BP42772 138 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 ACTR1AP61163 376 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 CXADRP78310 365 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 COL9A2Q14055 689 aaPredicted RBP17.62■□□□□ 0.41
HDDC3-201ENST00000330334 TFDP2Q14188 446 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 TEX44Q53QW1 395 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 FOXR1Q6PIV2 292 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 DOK6Q6PKX4 331 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 RFX6Q8HWS3 928 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 GALNT13Q8IUC8 556 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 RNF25Q96BH1 459 aaPredicted RBP17.62■□□□□ 0.41
HDDC3-201ENST00000330334 SRPK1Q96SB4 655 aaKnown RBP17.62■□□□□ 0.41
HDDC3-201ENST00000330334 ZFYVE1Q9HBF4 777 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 RAD18Q9NS91 495 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 ATXN7L1Q9ULK2 861 aaPredicted RBP17.62■□□□□ 0.41
HDDC3-201ENST00000330334 ALG6Q9Y672 507 aa17.62■□□□□ 0.41
HDDC3-201ENST00000330334 BAHCC1Q9P281 2608 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 EIF4E1BA6NMX2 242 aaKnown RBP17.61■□□□□ 0.41
HDDC3-201ENST00000330334 SPOPO43791 374 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 DNAJC6O75061 913 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 JMJD7P0C870 316 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 CD1CP29017 333 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 SLC5A2P31639 672 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 FASLGP48023 281 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 OR1D5P58170 312 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 VAC14Q08AM6 782 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 MFSD7Q6UXD7 560 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 CCDC170Q8IYT3 715 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 TC2NQ8N9U0 490 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 EID2BQ96D98 161 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 WBP1Q96G27 269 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 AGAP3Q96P47 875 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 DPYSL5Q9BPU6 564 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 SUDS3Q9H7L9 328 aaPredicted RBP17.61■□□□□ 0.41
HDDC3-201ENST00000330334 NFKBIL1Q9UBC1 381 aaPredicted RBP17.61■□□□□ 0.41
HDDC3-201ENST00000330334 LOXL2Q9Y4K0 774 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 ATMQ13315 3056 aa17.61■□□□□ 0.41
HDDC3-201ENST00000330334 AHCTF1Q8WYP5 2266 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 GPR89AB7ZAQ6 455 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 ERVH48-1M5A8F1 160 aa17.6■□□□□ 0.41
HDDC3-201ENST00000330334 PPM1DO15297 605 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms