RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 AAR2Q9Y312 384 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-201ENST00000254193 NEUROG3Q9Y4Z2 214 aa17.86■□□□□ 0.45
SNRPA1-201ENST00000254193 ANKRD36A6QL64 1941 aa17.86■□□□□ 0.45
SNRPA1-201ENST00000254193 FAM149AA5PLN7 773 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 LIASO43766 372 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 METTL18O95568 372 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 FGF1P05230 155 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 BPIP17213 487 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 ADRA1AP35348 466 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 ILKQ13418 452 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 SNX1Q13596 522 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 C6orf132Q5T0Z8 1188 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 LVRNQ6Q4G3 990 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 RANBP10Q6VN20 620 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 MARK2Q7KZI7 788 aaKnown RBP17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 GKN2Q86XP6 184 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 REXO1L1PQ8IX06 675 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 SLC35F3Q8IY50 421 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 TTC30BQ8N4P2 665 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 TAB3Q8N5C8 712 aaPredicted RBP17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 SCG3Q8WXD2 468 aaKnown RBP17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 COX14Q96I36 57 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 PDLIM2Q96JY6 352 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 SPATA16Q9BXB7 569 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 SIRPGQ9P1W8 387 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 GULP1Q9UBP9 304 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 GPR34Q9UPC5 381 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 MSRB2Q9Y3D2 182 aa17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 OAS3Q9Y6K5 1087 aaKnown RBP17.85■□□□□ 0.45
SNRPA1-201ENST00000254193 CPED1A4D0V7 1026 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 BUD23O43709 281 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 USP12O75317 370 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 ASMTLO95671 621 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 ATP1A1P05023 1023 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 CXCR5P32302 372 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 DUSP3P51452 185 aaPredicted RBP17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 NR0B2Q15466 257 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 OASLQ15646 514 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 SMAD1Q15797 465 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 PARP6Q2NL67 630 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 GUSBP11Q6P575 273 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 TMPRSS7Q7RTY8 843 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 SDR16C5Q8N3Y7 309 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 FAM46DQ8NEK8 389 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 CNTNAP3BQ96NU0 1288 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 FRMD8P1Q9BZ68 369 aaPredicted RBP17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 CNTNAP3Q9BZ76 1288 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 CDH19Q9H159 772 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 TRABDQ9H4I3 376 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 RAD18Q9NS91 495 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 TRMT1Q9NXH9 659 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 HACD3Q9P035 362 aa17.84■□□□□ 0.45
SNRPA1-201ENST00000254193 FAM221BA6H8Z2 402 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 CEP104O60308 925 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 FGGP02679 453 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 IVLP07476 585 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 CDK4P11802 303 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 HMGCLP35914 325 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 ADCY8P40145 1251 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 DCDC1P59894 354 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 SIX1Q15475 284 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 ZNF648Q5T619 568 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 CCNI2Q6ZMN8 369 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 EFL1Q7Z2Z2 1120 aaKnown RBP17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 GLT6D1Q7Z4J2 308 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 SFTPA2Q8IWL1 248 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 KYQ8NBH2 561 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 SCARF2Q96GP6 870 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 ARFGAP3Q9NP61 516 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 EVA1BQ9NVM1 165 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 NCKIPSDQ9NZQ3 722 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 NFKBIL1Q9UBC1 381 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 ZNF148Q9UQR1 794 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 PLEKHM1Q9Y4G2 1056 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 GPSM3Q9Y4H4 160 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 ST14Q9Y5Y6 855 aa17.83■□□□□ 0.44
SNRPA1-201ENST00000254193 LRRK1Q38SD2 2015 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 COL5A1P20908 1838 aaPredicted RBP17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 ZSCAN12O43309 604 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 IFNB1P01574 187 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 AK4P27144 223 aaPredicted RBP17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 STIP1P31948 543 aaKnown RBP17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 RPIAP49247 311 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 ILF3Q12906 894 aaKnown RBP eCLIP17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 PTPRCAPQ14761 206 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 ZNF569Q5MCW4 686 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 HES3Q5TGS1 186 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 DENND5AQ6IQ26 1287 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 PRUNE1Q86TP1 453 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 NRROSQ86YC3 692 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 KLHDC8BQ8IXV7 354 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 GALNT15Q8N3T1 639 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 TRAM1L1Q8N609 369 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 ARL10Q8N8L6 244 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 IFI44Q8TCB0 444 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 GPBAR1Q8TDU6 330 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 GLMNQ92990 594 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 RTP4Q96DX8 246 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 PPP1R2P1Q96PQ5 205 aa17.82■□□□□ 0.44
SNRPA1-201ENST00000254193 TBL1YQ9BQ87 522 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms