RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Defb14Q7TNV9 67 aa14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 Dhx33Q80VY9 698 aaKnown RBP14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 Stkld1Q80YS9 662 aa14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 Ppp4r4Q8C0Y0 875 aa14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 TdrpQ8C5P7 182 aa14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 ItchQ8C863 864 aa14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 Trip10Q8CJ53 603 aa14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 Ppp1r16aQ923M0 524 aa14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 Q9D1F3 157 aa14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 Necab3Q9D6J4 353 aa14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 Spry1Q9QXV9 313 aa14.76□□□□□ -0.05
Nup88-202ENSMUST00000108530 UprtB1AVZ0 310 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Fam151bD3YUE4 279 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Tekt5G5E8A8 557 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 CkmP07310 381 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Ctla2bP12400 113 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Htr7P32304 448 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 RcvrnP34057 202 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Pebp1P70296 187 aaKnown RBP14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Ctps2P70303 586 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Rab33aP97950 237 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 GmncQ3URY2 333 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 HadhQ61425 314 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Dennd2cQ6P9P8 914 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Atp2c1Q80XR2 918 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Lrrc27Q80YS5 523 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 4921511C20RikQ8BVT7 469 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Tmc7Q8C428 726 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Cfap61Q8CEL2 1252 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Lrrc3bQ8VCH9 259 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Necab2Q91ZP9 389 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Krt5Q922U2 580 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Cdk9Q99J95 372 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Mlf2Q99KX1 247 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Tubb3Q9ERD7 450 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Jam2Q9JI59 298 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 OtofQ9ESF1 1997 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Fam209A2APA5 170 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Gbp4A4UUI3 631 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 SelenovD3YXG1 328 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Cd19P25918 547 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 SbplQ3TUY3 232 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 HecaQ3V1N5 544 aaKnown RBP14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Arhgef15Q5FWH6 849 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Gstt2Q61133 244 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Tnfaip2Q61333 691 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Smg5Q6ZPY2 1017 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Fam107aQ78TU8 144 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Nmur2Q8BZ39 395 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Samd7Q8C8Y5 445 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Rtn4rl1Q8K0S5 445 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Spp2Q8K1I3 203 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Wdr74Q8VCG3 384 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Olfr695Q8VFM3 315 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Pdzd3Q99MJ6 498 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Ndc80Q9D0F1 642 aaKnown RBP14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Riok3Q9DBU3 519 aaKnown RBP14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Isca2Q9DCB8 154 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Gpr63Q9EQQ3 425 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Rbck1Q9WUB0 508 aa14.75□□□□□ -0.05
Nup88-202ENSMUST00000108530 Zfc3h1B2RT41 1992 aaKnown RBP14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Acnat1A2AKK5 416 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Olfr742A2RTP5 311 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Tmem45a2B7ZWJ5 289 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Zc3h7aE9PWW6 970 aaKnown RBP14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Vmn2r96E9PZU5 664 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Vmn2r116E9Q6I0 856 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Olfr726E9Q8X3 321 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Rc3h2P0C090 1187 aaKnown RBP14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 RhoP15409 348 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Hnf1bP27889 558 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 RxraP28700 467 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Ap1s1P61967 158 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 FerP70451 823 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Olfr725Q05A45 321 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Dnajb14Q149L6 379 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Pabpn1lQ5XFR0 273 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Caprin1Q60865 707 aaKnown RBP14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Smpd4Q6ZPR5 823 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Rslcan18Q7M6X5 460 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Zfp606Q7TSV0 794 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Trim8Q99PJ2 551 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Tmbim4Q9DA39 238 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Rpn2Q9DBG6 631 aaKnown RBP14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Dach1Q9QYB2 751 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 PodxlQ9R0M4 503 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Cyp2g1Q9WV19 494 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 SufuQ9Z0P7 484 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 4931406B18RikA2RSL7 367 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Pnldc1B2RXZ1 531 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Armc4B2RY50 1037 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Vmn2r14E9Q759 848 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Stam2O88811 523 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 P01636 108 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Tcf3P15806 651 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 CryaaP24622 196 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Tbc1d10aP58802 500 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Hrh1P70174 488 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Q3UY34 256 aa14.74□□□□□ -0.05
Nup88-202ENSMUST00000108530 Taar8aQ5QD07 344 aa14.74□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 54.2 ms