RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 NR2C2P49116 596 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 GABREP78334 506 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 TFDP2Q14188 446 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 GALNT3Q14435 633 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 KAZNQ674X7 775 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 KDELC2Q7Z4H8 507 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 TRIM74Q86UV6 250 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 NRROSQ86YC3 692 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 NRSN1Q8IZ57 195 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 GPBAR1Q8TDU6 330 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 IMP4Q96G21 291 aaKnown RBP21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 LYSMD1Q96S90 227 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 MLPHQ9BV36 600 aaPredicted RBP21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 ADGRE3Q9BY15 652 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 BRD8Q9H0E9 1235 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 DPEP2Q9H4A9 486 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 SPATS2LQ9NUQ6 558 aaKnown RBP21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 SLC17A4Q9Y2C5 497 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 TMEM98Q9Y2Y6 226 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 ENTPD2Q9Y5L3 495 aa21.37■■□□□ 1.01
PPP4R1-228ENST00000584074 ZFYVE26Q68DK2 2539 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 TCEA3O75764 348 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 NDUFA10O95299 355 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 PRKD1Q15139 912 aaPredicted RBP21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 C11orf63Q6NUN7 778 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 NT5DC3Q86UY8 548 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 NLRP8Q86W28 1048 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 KATNAL2Q8IYT4 538 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 WDR48Q8TAF3 677 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 TRIB3Q96RU7 358 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 SLC25A51Q9H1U9 297 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 POLR1BQ9H9Y6 1135 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 LUC7LQ9NQ29 371 aaKnown RBP21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 TRNAU1APQ9NX07 287 aaKnown RBP21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 ST14Q9Y5Y6 855 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 ACACAQ13085 2346 aa21.36■■□□□ 1.01
PPP4R1-228ENST00000584074 ASXL3Q9C0F0 2248 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 A0A1W2PNU3 283 aaPredicted RBP21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 NTN3O00634 580 aaPredicted RBP21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 ZRANB2O95218 330 aaKnown RBP eCLIP21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 FECHP22830 423 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 AK4P27144 223 aaPredicted RBP21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 ACTN2P35609 894 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 EIF2S3P41091 472 aaKnown RBP21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 LSSP48449 732 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 PDX1P52945 283 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 CCL7P80098 99 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 SPIDRQ14159 915 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 TBC1D25Q3MII6 688 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 C14orf28Q4W4Y0 310 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 CERCAMQ5T4B2 595 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 TMTC1Q8IUR5 882 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 RCOR2Q8IZ40 523 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 OR6C4Q8NGE1 309 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 SPATA22Q8NHS9 363 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 SNIP1Q8TAD8 396 aaKnown RBP21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 KRT35Q92764 455 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 FGF11Q92914 225 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 TADA1Q96BN2 335 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 HIC2Q96JB3 615 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 WDR24Q96S15 920 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 GLOD4Q9HC38 313 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 RNF215Q9Y6U7 377 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 DUSP10Q9Y6W6 482 aa21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 COL27A1Q8IZC6 1860 aaPredicted RBP21.35■■□□□ 1.01
PPP4R1-228ENST00000584074 INPP4BO15327 924 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 IVLP07476 585 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 PIRTP0C851 137 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 GLB1P16278 677 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 PTPN3P26045 913 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 ITPKBP27987 946 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 ADCY8P40145 1251 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 SPINT3P49223 89 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 ILF3Q12906 894 aaKnown RBP eCLIP21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 HLTFQ14527 1009 aaKnown RBP eCLIP21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 PCSK7Q16549 785 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 TEX44Q53QW1 395 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 TFDP3Q5H9I0 405 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 C3orf38Q5JPI3 329 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 MARK2Q7KZI7 788 aaKnown RBP21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 BZW1Q7L1Q6 419 aaKnown RBP21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 LYSMD3Q7Z3D4 306 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 DAAM2Q86T65 1068 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 CCDC50Q8IVM0 306 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 Q8N9G6 341 aaPredicted RBP21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 EXD1Q8NHP7 514 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 TFB1MQ8WVM0 346 aaKnown RBP21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 GRAMD1AQ96CP6 724 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 SCARF2Q96GP6 870 aaPredicted RBP21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 COX14Q96I36 57 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 TEKT5Q96M29 485 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 GSDMCQ9BYG8 508 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 SATB2Q9UPW6 733 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 REXO2Q9Y3B8 237 aaKnown RBP21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 PLEKHM1Q9Y4G2 1056 aa21.34■■□□□ 1.01
PPP4R1-228ENST00000584074 hCG_1818297A0A087WSY0 165 aa21.33■■□□□ 1.01
PPP4R1-228ENST00000584074 A0A1W2PQM1 296 aa21.33■■□□□ 1.01
PPP4R1-228ENST00000584074 PMS2P1A4D2B8 440 aa21.33■■□□□ 1.01
PPP4R1-228ENST00000584074 MT-CYBP00156 380 aaPredicted RBP21.33■■□□□ 1.01
PPP4R1-228ENST00000584074 FGF1P05230 155 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms