RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 C16orf89Q6UX73 402 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 ZNF227Q86WZ6 799 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 MIB1Q86YT6 1006 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 CEP97Q8IW35 865 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 DSELQ8IZU8 1212 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 KIAA1958Q8N8K9 716 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 FAM156AQ8NDB6 213 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 ZSCAN18Q8TBC5 510 aaPredicted RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 GPR22Q99680 433 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 NPAS2Q99743 824 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 POMKQ9H5K3 350 aa5.38□□□□□ -1.55
VAPA-203ENST00000577539 PAPOLBQ9NRJ5 636 aaKnown RBP5.38□□□□□ -1.55
VAPA-203ENST00000577539 WDR90Q96KV7 1748 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 F8W810 466 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 AP3B1O00203 1094 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 MATN2O00339 956 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 ZNF195O14628 629 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 AURKAO14965 403 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 CCNT2O60583 730 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 JUNP05412 331 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 HLA-DQB2P05538 268 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 SLC35E2BP0CK96 405 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 BPIP17213 487 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 GABRB3P28472 473 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 GRK4P32298 578 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 SLC1A2P43004 574 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 THOP1P52888 689 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 WNT3AP56704 352 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 PRAMEP78395 509 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 SCAPQ12770 1279 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 IKBKEQ14164 716 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 PPP4R4Q6NUP7 873 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 CNSTQ6PJW8 725 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 PIP4K2CQ8TBX8 421 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 CASP10Q92851 521 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 ADAM2Q99965 735 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 RTKNQ9BST9 563 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 SEZ6LQ9BYH1 1024 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 DRC3Q9H069 523 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 MRPL46Q9H2W6 279 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 SUDS3Q9H7L9 328 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 AGO3Q9H9G7 860 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 COPS7BQ9H9Q2 264 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 WDR41Q9HAD4 459 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 SP110Q9HB58 689 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 OBP2AQ9NY56 170 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 NCKIPSDQ9NZQ3 722 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 PDP2Q9P2J9 529 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 SUCOQ9UBS9 1254 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 ANKRD6Q9Y2G4 727 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 RAD54BQ9Y620 910 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 TRIP12Q14669 1992 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 ATP6AP2A0A1C7CYW4 349 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 GLTPD2A6NH11 291 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 RNASEH1O60930 286 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 H2AFYO75367 372 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 ATP6AP2O75787 350 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 XRCC1P18887 633 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 MAOBP27338 520 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 HADHAP40939 763 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 HALP42357 657 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 PAPOLAP51003 745 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 KPNA2P52292 529 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 SLC5A3P53794 718 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 NME5P56597 212 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 GJA9P57773 515 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 DLG1Q12959 904 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 CMPK2Q5EBM0 449 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 RBM20Q5T481 1227 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 METTL21CQ5VZV1 264 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 KLC3Q6P597 504 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 HEXDCQ8WVB3 486 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 RSPH1Q8WYR4 309 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 KIFC1Q9BW19 673 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 UBE2OQ9C0C9 1292 aaKnown RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 EFCAB1Q9HAE3 211 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 PADI3Q9ULW8 664 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 TMPRSS2O15393 492 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 IRAK2O43187 625 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 GPR39O43194 453 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 ZNF189O75820 626 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 SUPT7LO94864 414 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 ALBP02768 609 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 PIRTP0C851 137 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 CCDC166P0CW27 439 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 ARSAP15289 507 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 PPARGP37231 505 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 CD86P42081 329 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 ALDH1A3P47895 512 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 IRX1P78414 480 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 ADAM17P78536 824 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 EFEMP1Q12805 493 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 MLC1Q15049 377 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 GSTA3Q16772 222 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 FAM83EQ2M2I3 478 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 SLC39A12Q504Y0 691 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 AGKQ53H12 422 aa5.37□□□□□ -1.55
VAPA-203ENST00000577539 GDF6Q6KF10 455 aaPredicted RBP5.37□□□□□ -1.55
VAPA-203ENST00000577539 CENPLQ8N0S6 344 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms