RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 ENGP17813 658 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 HSPA9P38646 679 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 EIF3EP60228 445 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 RAD51Q06609 339 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 GRIK2Q13002 908 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 SETDB1Q15047 1291 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 RPS6KA1Q15418 735 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 TMEM52BQ4KMG9 183 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 TEX44Q53QW1 395 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 ZNF569Q5MCW4 686 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 WDR45BQ5MNZ6 344 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 PRAMEF14Q5SWL7 426 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 SLC23A3Q6PIS1 610 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 GCNT7Q6ZNI0 430 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 KDELC2Q7Z4H8 507 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 SPATS2Q86XZ4 545 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 SLC13A5Q86YT5 568 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 DTWD1Q8N5C7 304 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 GLIS1Q8NBF1 620 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 TMEM145Q8NBT3 493 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 TRIM58Q8NG06 486 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 SLC35B2Q8TB61 432 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 NSMCE1Q8WV22 266 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 HTR3CQ8WXA8 447 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 IMP4Q96G21 291 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 MS4A14Q96JA4 679 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 BMFQ96LC9 184 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 GLOD4Q9HC38 313 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 MBNL1Q9NR56 388 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 UBP1Q9NZI7 540 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 B4GALT6Q9UBX8 382 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 DNPEPQ9ULA0 475 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 PNMA8BQ9ULN7 279 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 ADAMTS9Q9P2N4 1935 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 DOCK9Q9BZ29 2069 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 A0A1B0GTW7 788 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 PRR5-ARHGAP8B1AHC4 643 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 H7C0C1 242 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 KCNN4O15554 427 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 SOCS5O75159 536 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 DEAF1O75398 565 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 TJP3O95049 919 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 B3GALT4O96024 378 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 CPP00450 1065 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 SERPINF2P08697 491 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 C6P13671 934 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 HNF1BP35680 557 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 IGFALSP35858 605 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 CHRNA4P43681 627 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 ATP5OP48047 213 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 LIG3P49916 1009 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 FAM193AP78312 1265 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 ARHGAP8P85298 464 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 LMNB2Q03252 620 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 XRCC4Q13426 336 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 GALNT3Q14435 633 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 OASLQ15646 514 aaKnown RBP9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 CNGA3Q16281 694 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 CDKN3Q16667 212 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 DUOXA1Q1HG43 343 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 RSPO4Q2I0M5 234 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 TSNAXIP1Q2TAA8 658 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 KIF19Q2TAC6 998 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 SYCP2LQ5T4T6 812 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 CCDC181Q5TID7 509 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 KCTD16Q68DU8 428 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 BRAT1Q6PJG6 821 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 KDELC1Q6UW63 502 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 MICALCLQ6ZW33 695 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 HSD11B1LQ7Z5J1 315 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 SLC22A18ASQ8N1D0 253 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 CBARPQ8N350 705 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 TP53I13Q8NBR0 393 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 PLA2G15Q8NCC3 412 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 CCDC110Q8TBZ0 833 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 HCAR2Q8TDS4 363 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 COG1Q8WTW3 980 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 C1orf54Q8WWF1 131 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 ANP32BQ92688 251 aaKnown RBP9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 RAB7BQ96AH8 199 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 EID2BQ96D98 161 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 SCARF2Q96GP6 870 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 SERAC1Q96JX3 654 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 ALS2CR12Q96Q35 445 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 MCCC1Q96RQ3 725 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 WDR24Q96S15 920 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 MLPHQ9BV36 600 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 SLC17A9Q9BYT1 436 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 SLC25A51Q9H1U9 297 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 CARD9Q9H257 536 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 AMACRQ9UHK6 382 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 SNX11Q9Y5W9 270 aa9.49□□□□□ -0.89
NPLOC4-219ENST00000576713 LRRK1Q38SD2 2015 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 SPTBN4Q9H254 2564 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 HACD1B0YJ81 288 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 K7ESM1 405 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 TM4SF5O14894 197 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms