RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 DENRO43583 198 aaKnown RBP14.75□□□□□ -0.05
DDX55-209ENST00000542286 KLKB1P03952 638 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 DNAJB2P25686 324 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 SLC5A2P31639 672 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 SP3Q02447 781 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 PIGGQ5H8A4 983 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 PIWIL4Q7Z3Z4 852 aaKnown RBP14.75□□□□□ -0.05
DDX55-209ENST00000542286 EFHBQ8N7U6 833 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 PTGR2Q8N8N7 351 aaPredicted RBP14.75□□□□□ -0.05
DDX55-209ENST00000542286 RP9Q8TA86 221 aaKnown RBP14.75□□□□□ -0.05
DDX55-209ENST00000542286 HSPBAP1Q96EW2 488 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 ZNF512Q96ME7 567 aaPredicted RBP14.75□□□□□ -0.05
DDX55-209ENST00000542286 SEMA6AQ9H2E6 1030 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 APPL1Q9UKG1 709 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 SH3GLB1Q9Y371 365 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 CHD7Q9P2D1 2997 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 THSD7BQ9C0I4 1608 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 LOC285095A0A1B0GVY8 99 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 ARHGAP10A1A4S6 786 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 TBKBP1A7MCY6 615 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 CBX4O00257 560 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 CASQ2O14958 399 aaPredicted RBP14.75□□□□□ -0.05
DDX55-209ENST00000542286 OR1I1O60431 355 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 CSPG5O95196 566 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 CHRM3P20309 590 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 FGFR3P22607 806 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 HOXD9P28356 352 aaPredicted RBP14.75□□□□□ -0.05
DDX55-209ENST00000542286 ALDH1A3P47895 512 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 CLCN5P51795 746 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 CCL23P55773 120 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 SH3BP2P78314 561 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 UNC50Q53HI1 259 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 KLHL35Q6PF15 583 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 IYDQ6PHW0 289 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 GALNT4Q8N4A0 578 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 TEX26Q8N6G2 289 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 OR4K2Q8NGD2 314 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 PTCD2Q8WV60 388 aaKnown RBP14.75□□□□□ -0.05
DDX55-209ENST00000542286 CNDP1Q96KN2 507 aa14.75□□□□□ -0.05
DDX55-209ENST00000542286 ZFRQ96KR1 1074 aaKnown RBP14.75□□□□□ -0.05
DDX55-209ENST00000542286 POLR1EQ9GZS1 481 aaKnown RBP14.75□□□□□ -0.05
DDX55-209ENST00000542286 TRMUO75648 421 aaKnown RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 GLP2RO95838 553 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 ALDH2P05091 517 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 FAM189BP81408 668 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 PDAP1Q13442 181 aaKnown RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 PLA2G4EQ3MJ16 856 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 LRRC8DQ7L1W4 858 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 OR6K2Q8NGY2 324 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 MRPL1Q9BYD6 325 aaKnown RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 MRPS26Q9BYN8 205 aaKnown RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 MFSD1Q9H3U5 465 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 STK39Q9UEW8 545 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 TRAF6Q9Y4K3 522 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 PCDHB7Q9Y5E2 793 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 TMEM221A6NGB7 291 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 NPHS1O60500 1241 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 SNAP91O60641 907 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 PRAMEF11O60813 436 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 ALDOCP09972 364 aaKnown RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 PRDX3P30048 256 aaKnown RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 OR1D2P34982 312 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 NRG1Q02297 640 aaPredicted RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 IL10RBQ08334 325 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 OGFRL1Q5TC84 451 aaPredicted RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 FAM117BQ6P1L5 589 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 MDGA1Q8NFP4 955 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 TRPC4APQ8TEL6 797 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 DCUN1D1Q96GG9 259 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 RPL10LQ96L21 214 aaKnown RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 PRPF18Q99633 342 aaKnown RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 TDRKHQ9Y2W6 561 aaKnown RBP14.74□□□□□ -0.05
DDX55-209ENST00000542286 ZNF711Q9Y462 761 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 TIMM22Q9Y584 194 aa14.74□□□□□ -0.05
DDX55-209ENST00000542286 SLC38A8A6NNN8 435 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 IQCF5A8MTL0 148 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 F5H5T6 163 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 H3BSA7 217 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 UBDO15205 165 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 CD1DP15813 335 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 CST5P28325 142 aaPredicted RBP14.73□□□□□ -0.05
DDX55-209ENST00000542286 PRDX6P30041 224 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 MRPL58Q14197 206 aaKnown RBP14.73□□□□□ -0.05
DDX55-209ENST00000542286 FASTKQ14296 549 aaKnown RBP14.73□□□□□ -0.05
DDX55-209ENST00000542286 PAQR3Q6TCH7 311 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 DEFB128Q7Z7B8 93 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 PELI3Q8N2H9 469 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 LRRC43Q8N309 656 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 CPSF7Q8N684 471 aaKnown RBP14.73□□□□□ -0.05
DDX55-209ENST00000542286 NUDT8Q8WV74 236 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 ATP6V1E2Q96A05 226 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 CNBD2Q96M20 576 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 PKP2Q99959 881 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 RNF38Q9H0F5 515 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 Q9H521 79 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 SEMA4BQ9NPR2 832 aaPredicted RBP14.73□□□□□ -0.05
DDX55-209ENST00000542286 UTP6Q9NYH9 597 aaKnown RBP14.73□□□□□ -0.05
DDX55-209ENST00000542286 VTI1BQ9UEU0 232 aa14.73□□□□□ -0.05
DDX55-209ENST00000542286 PAIP2BQ9ULR5 123 aaKnown RBP14.73□□□□□ -0.05
DDX55-209ENST00000542286 SCN5AQ14524 2016 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms