RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZNF195O14628 629 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 ACSL4O60488 711 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 ZMPSTE24O75844 475 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 SEC24AO95486 1093 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 CAPNS1P04632 268 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 GSTT2P0CG29 244 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 GSTT2BP0CG30 244 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 S100A1P23297 94 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 PARP15Q460N3 678 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 ARL13AQ5H913 290 aaPredicted RBP11.56□□□□□ -0.56
USP35-207ENST00000530546 NIPAL1Q6NVV3 410 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 DCDC5Q6ZRR9 648 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 AMIGO2Q86SJ2 522 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 HIPK4Q8NE63 616 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 OR13J1Q8NGT2 312 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 HEXDCQ8WVB3 486 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 OLFM1Q99784 485 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 WDR55Q9H6Y2 383 aaPredicted RBP11.56□□□□□ -0.56
USP35-207ENST00000530546 CYP4F11Q9HBI6 524 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 MRM3Q9HC36 420 aaKnown RBP11.56□□□□□ -0.56
USP35-207ENST00000530546 CYP4F12Q9HCS2 524 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 PALMDQ9NP74 551 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 SCHIP1Q9P0W5 487 aaPredicted RBP11.56□□□□□ -0.56
USP35-207ENST00000530546 GPC6Q9Y625 555 aaPredicted RBP11.56□□□□□ -0.56
USP35-207ENST00000530546 DLX3O60479 287 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 ADAM23O75077 832 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 CLASP2O75122 1294 aaKnown RBP11.55□□□□□ -0.56
USP35-207ENST00000530546 PLD1Q13393 1074 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 LIPMQ5VYY2 423 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 C16orf59Q7L2K0 433 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 HPS6Q86YV9 775 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 DEFB107AQ8IZN7 70 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 TMEM151AQ8N4L1 468 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 DDHD1Q8NEL9 900 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 TBATAQ96M53 351 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 RANBP9Q96S59 729 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 TMEM175Q9BSA9 504 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 VN1R3Q9BXE9 311 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 POLR1EQ9GZS1 481 aaKnown RBP11.55□□□□□ -0.56
USP35-207ENST00000530546 ILKAPQ9H0C8 392 aaPredicted RBP11.55□□□□□ -0.56
USP35-207ENST00000530546 ARNT2Q9HBZ2 717 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 DNAJC28Q9NX36 388 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 SMPD4Q9NXE4 827 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 MARCH4Q9P2E8 410 aaPredicted RBP11.55□□□□□ -0.56
USP35-207ENST00000530546 MID2Q9UJV3 735 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 CDH7Q9ULB5 785 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 CRYL1Q9Y2S2 319 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 FIS1Q9Y3D6 152 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 MTF2Q9Y483 593 aaPredicted RBP11.55□□□□□ -0.56
USP35-207ENST00000530546 ARL5AQ9Y689 179 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 H0YJX3 145 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 PITPNM1O00562 1244 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 DCXO43602 365 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 PRAMEF11O60813 436 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 APOA4P06727 396 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 C8BP07358 591 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 ZDHHC11BP0C7U3 371 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 PSMC3P17980 439 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 ITGAXP20702 1163 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 SGSHP51688 502 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 RING1Q06587 406 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 TCHHL1Q5QJ38 904 aaPredicted RBP11.55□□□□□ -0.56
USP35-207ENST00000530546 PAOXQ6QHF9 649 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 PHTF2Q8N3S3 785 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 TEX26Q8N6G2 289 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 STYXQ8WUJ0 223 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 OR52B2Q96RD2 323 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 NEURL2Q9BR09 285 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 RNF208Q9H0X6 261 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 TRPC7Q9HCX4 862 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 TSC22D4Q9Y3Q8 395 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 MYLKQ15746 1914 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 TMEM114B3SHH9 223 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 COCHO43405 550 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 GNRH1P01148 92 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 ATXN1LP0C7T5 689 aaKnown RBP11.55□□□□□ -0.56
USP35-207ENST00000530546 PLK1P53350 603 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 CCDC117Q8IWD4 279 aaPredicted RBP11.55□□□□□ -0.56
USP35-207ENST00000530546 SDR16C5Q8N3Y7 309 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 SMIM14Q96QK8 99 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 ATP13A1Q9HD20 1204 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 UTP6Q9NYH9 597 aaKnown RBP11.55□□□□□ -0.56
USP35-207ENST00000530546 RIMS3Q9UJD0 308 aa11.55□□□□□ -0.56
USP35-207ENST00000530546 ZNF840PA6NDX5 716 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 SORBS2O94875 1100 aaKnown RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 ESRRBO95718 433 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 KLKB1P03952 638 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 EPHA3P29320 983 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 CORO1AP31146 461 aaKnown RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 MAPKAPK2P49137 400 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 SLC11A2P49281 568 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 YBEYP58557 167 aaPredicted RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 GNA12Q03113 381 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 KCNC4Q03721 635 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 GK3PQ14409 553 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 INAQ16352 499 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 ZNF362Q5T0B9 420 aaPredicted RBP11.54□□□□□ -0.56
USP35-207ENST00000530546 HECTD3Q5T447 861 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 NXNQ6DKJ4 435 aa11.54□□□□□ -0.56
USP35-207ENST00000530546 SLC2A7Q6PXP3 512 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms