RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ETS2P15036 469 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 ALDH3B2P48448 385 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 KCNQ1P51787 676 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 WNT3AP56704 352 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 DNAJB13P59910 316 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 NSUN2Q08J23 767 aaKnown RBP eCLIP18.3■□□□□ 0.52
SDC2-202ENST00000518385 USP4Q13107 963 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 SLC12A1Q13621 1099 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 PPM1JQ5JR12 505 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 PDE12Q6L8Q7 609 aaKnown RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 CES3Q6UWW8 571 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 CCDC149Q6ZUS6 474 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 CHERPQ8IWX8 916 aaKnown RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 TNS4Q8IZW8 715 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 TMEM102Q8N9M5 508 aaPredicted RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 HIPK4Q8NE63 616 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 STYXQ8WUJ0 223 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 PSMG2Q969U7 264 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 ZNF419Q96HQ0 510 aaPredicted RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 OR52B2Q96RD2 323 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 MRPL1Q9BYD6 325 aaKnown RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 NUF2Q9BZD4 464 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 RHOJQ9H4E5 214 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 NT5MQ9NPB1 228 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 PNPLA3Q9NST1 481 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 IRAK4Q9NWZ3 460 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 GALNT8Q9NY28 637 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 RSL24D1Q9UHA3 163 aaKnown RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 HEATR9A2RTY3 570 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 J3KR12 359 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 PMPCBO75439 489 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 TRMUO75648 421 aaKnown RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 EPOP01588 193 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 C7P10643 843 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 TPH1P17752 444 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 TFEBP19484 476 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 CES1P23141 567 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 NMBRP28336 390 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 TTKP33981 857 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 ETFBP38117 255 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 PBX2P40425 430 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 NUP107P57740 925 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 MRPS22P82650 360 aaKnown RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 SLC10A7Q0GE19 358 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 MYLK3Q32MK0 819 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 KIAA0930Q6ICG6 404 aaPredicted RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 PIWIL4Q7Z3Z4 852 aaKnown RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 BHLHE22Q8NFJ8 381 aaPredicted RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 CEP70Q8NHQ1 597 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 ZFP28Q8NHY6 868 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 PABPC5Q96DU9 382 aaKnown RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 KLF16Q9BXK1 252 aaPredicted RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.3■□□□□ 0.52
SDC2-202ENST00000518385 STOML2Q9UJZ1 356 aa18.3■□□□□ 0.52
SDC2-202ENST00000518385 ILVBLA1L0T0 632 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 GRID2O43424 1007 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 CLASP2O75122 1294 aaKnown RBP18.29■□□□□ 0.52
SDC2-202ENST00000518385 STC2O76061 302 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 BMP10O95393 424 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 GLUD1P00367 558 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 XRCC1P18887 633 aaPredicted RBP18.29■□□□□ 0.52
SDC2-202ENST00000518385 IRS1P35568 1242 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 ATP4BP51164 291 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 CLCN4P51793 760 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 GPM6BQ13491 265 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 MYBPC3Q14896 1274 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 ADGRF1Q5T601 910 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 ALG1LQ6GMV1 187 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 ZNF783Q6ZMS7 281 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 ATG14Q6ZNE5 492 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 ZNF354CQ86Y25 554 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 SHKBP1Q8TBC3 707 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 MAPK15Q8TD08 544 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 PEX13Q92968 403 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 PBXIP1Q96AQ6 731 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 RCN3Q96D15 328 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 VPS39Q96JC1 886 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 CNBD2Q96M20 576 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 PBX4Q9BYU1 374 aa18.29■□□□□ 0.52
SDC2-202ENST00000518385 POLR1EQ9GZS1 481 aaKnown RBP18.29■□□□□ 0.52
SDC2-202ENST00000518385 CCDC160A6NGH7 325 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 OR6B1O95007 311 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 PIGNO95427 931 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 H6PDO95479 791 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 SLC7A1P30825 629 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 GRIA4P48058 902 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 SERPINH1P50454 418 aaKnown RBP18.28■□□□□ 0.52
SDC2-202ENST00000518385 RHDQ02161 417 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 GNA12Q03113 381 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 ITKQ08881 620 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 GALNT1Q10472 559 aaPredicted RBP18.28■□□□□ 0.52
SDC2-202ENST00000518385 CEACAM7Q14002 265 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 TRIM25Q14258 630 aaKnown RBP18.28■□□□□ 0.52
SDC2-202ENST00000518385 SQLEQ14534 574 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 KCTD21Q4G0X4 260 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 NAPRTQ6XQN6 538 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 RTL10Q7L3V2 364 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 METTL25Q8N6Q8 603 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 TSPAN14Q8NG11 270 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms