RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MRGPRG-AS1Q2M3A8 158 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 GGNBP1Q5YKI7 109 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 PLEKHA7Q6IQ23 1121 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 METTL2BQ6P1Q9 378 aaKnown RBP3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 C19orf48Q6RUI8 117 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 SLC26A9Q7LBE3 791 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 KLHDC8BQ8IXV7 354 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 CPXCR1Q8N123 301 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 CNTROBQ8N137 903 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 ACVR1CQ8NER5 493 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 ORAI1Q96D31 301 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 METTL2AQ96IZ6 378 aaKnown RBP3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 PPP1R14DQ9NXH3 145 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 POU2F3Q9UKI9 436 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 ARHGAP26Q9UNA1 814 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 NAALADL1Q9UQQ1 740 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 LOXL2Q9Y4K0 774 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 LRRFIP2Q9Y608 721 aaKnown RBP3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 CYP46A1Q9Y6A2 500 aa3.32□□□□□ -1.88
HMGB1P29-201ENST00000505659 FAM172BPA6NC97 362 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 NTN3O00634 580 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 FGF17O60258 216 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 FGF5P12034 268 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 CDAP32320 146 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 GNL1P36915 607 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 IL15P40933 162 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 GABRB2P47870 512 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 CTCFP49711 727 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 PDE1BQ01064 536 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 NAA35Q5VZE5 725 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 ASB18Q6ZVZ8 466 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 TRMT1LQ7Z2T5 733 aaKnown RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 KMT5CQ86Y97 462 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 EPHX4Q8IUS5 362 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 RNF113BQ8IZP6 322 aaKnown RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 BEST3Q8N1M1 668 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 SLC24A4Q8NFF2 622 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 DMBX1Q8NFW5 382 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 OR5R1Q8NH85 324 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 RRP36Q96EU6 259 aaKnown RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 CDCA5Q96FF9 252 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 ZNF583Q96ND8 569 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 SH3GL2Q99962 352 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 TRMT61BQ9BVS5 477 aaKnown RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 AGXT2Q9BYV1 514 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 IFIH1Q9BYX4 1025 aaKnown RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 KIF9Q9HAQ2 790 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 BRF2Q9HAW0 419 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 ZNF334Q9HCZ1 680 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 SCRT2Q9NQ03 307 aa3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 INTS6Q9UL03 887 aaKnown RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 AAR2Q9Y312 384 aaKnown RBP3.31□□□□□ -1.88
HMGB1P29-201ENST00000505659 TAF1P21675 1872 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 A0A1W2PS18 150 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 GOLGA6L9A6NEM1 432 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 USP17L23D6RBM5 183 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 ZG16O60844 167 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 RRM1P23921 792 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 EPHA8P29322 1005 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 ICAM3P32942 547 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 TIMP3P35625 211 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 CPOXP36551 454 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 USP8P40818 1118 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 PIP4K2AP48426 406 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 CRIP2P52943 208 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 RAD23BP54727 409 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 TAS2R38P59533 333 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 CSNK2A1P68400 391 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 DRAP1Q14919 205 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 KRT24Q2M2I5 525 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 CXorf66Q5JRM2 361 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 KCTD8Q6ZWB6 473 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 FOXP4Q8IVH2 680 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 SRBD1Q8N5C6 995 aaKnown RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 CSNK2A3Q8NEV1 391 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 NFKBIDQ8NI38 313 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 SLC38A5Q8WUX1 472 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 GTF3C6Q969F1 213 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 NR1H4Q96RI1 486 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 PIP5K1AQ99755 562 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 SYT17Q9BSW7 474 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 PAIP1Q9H074 479 aaKnown RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 SLC28A3Q9HAS3 691 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 WASH6PQ9NQA3 447 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 ACSS1Q9NUB1 689 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 GAB2Q9UQC2 676 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 CRYL1Q9Y2S2 319 aa3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 GREB1LQ9C091 1923 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P29-201ENST00000505659 UTYO14607 1347 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 LILRA5A6NI73 299 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 LRRC53A6NM62 1247 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 TGFB1I1O43294 461 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 AMBPP02760 352 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 HOXB5P09067 269 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 DDX5P17844 614 aaKnown RBP3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 NR1D1P20393 614 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 PITX1P78337 314 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 RUNX1T1Q06455 604 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms