RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 PIRTP0C851 137 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 TGM2P21980 687 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 CA4P22748 312 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 CTNNA1P35221 906 aaKnown RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 TRIM23P36406 574 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 GPR1P46091 355 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 POLD2P49005 469 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 NR2C2P49116 596 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 KIAA1024LP59773 190 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 INSM1Q01101 510 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 PTSQ03393 145 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 ILKQ13418 452 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 PRKD1Q15139 912 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 QPCTQ16769 361 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 TFDP3Q5H9I0 405 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 RAET1GQ6H3X3 334 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 ZCCHC8Q6NZY4 707 aaKnown RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 AADACL2Q6P093 401 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 GUSBP11Q6P575 273 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 DOK6Q6PKX4 331 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 EFL1Q7Z2Z2 1120 aaKnown RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 TECPR1Q7Z6L1 1165 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 TMPRSS12Q86WS5 348 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 HEATR4Q86WZ0 1026 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 SLC35F3Q8IY50 421 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 FAM181AQ8N9Y4 354 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 KDF1Q8NAX2 398 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 ATL2Q8NHH9 583 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 EXD1Q8NHP7 514 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 IFI44Q8TCB0 444 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 PTCD2Q8WV60 388 aaKnown RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 TFB1MQ8WVM0 346 aaKnown RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 P3H4Q92791 437 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 AP2M1Q96CW1 435 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 RBM41Q96IZ5 413 aaKnown RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 CAPZA3Q96KX2 299 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 NAP1L3Q99457 506 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 AGAP2Q99490 1192 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 HERPUD2Q9BSE4 406 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 CARD6Q9BX69 1037 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 BRD8Q9H0E9 1235 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 TMEM168Q9H0V1 697 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 ABCG8Q9H221 673 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 CARD9Q9H257 536 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 GLOD4Q9HC38 313 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 UBP1Q9NZI7 540 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 PACSIN2Q9UNF0 486 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 PLXNB3Q9ULL4 1909 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 MAP1BP46821 2468 aaKnown RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 PTPRBP23467 1997 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 ARID1BQ8NFD5 2236 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 C1orf232A0A0U1RR37 186 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CAPN8A6NHC0 703 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 EFCAB8A8MWE9 144 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 ANKRD66B4E2M5 251 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 PSMD11O00231 422 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 TAF4O00268 1085 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 TPP1O14773 563 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 DDX3YO15523 660 aaKnown RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CEP104O60308 925 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 OPA1O60313 960 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 PMPCBO75439 489 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 MT-CYBP00156 380 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 MT-CO3P00414 261 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 SLC4A1P02730 911 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 FUCA1P04066 466 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 HOXC4P09017 264 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CDK4P11802 303 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 MYCLP1P12525 358 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 NFKB1P19838 968 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 KELP23276 732 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 PTPN3P26045 913 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CETN2P41208 172 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 GNPDA1P46926 289 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 DUSP3P51452 185 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 STC1P52823 247 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 RWDD2BP57060 319 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CDK3Q00526 305 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 E2F1Q01094 437 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CYP4F3Q08477 520 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 WASHC5Q12768 1159 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CAMK2BQ13554 666 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 ELOCQ15369 112 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 NR0B2Q15466 257 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 TEX44Q53QW1 395 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 PERM1Q5SV97 790 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 C6orf132Q5T0Z8 1188 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 SEL1L2Q5TEA6 688 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 MARK2Q7KZI7 788 aaKnown RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 BZW1Q7L1Q6 419 aaKnown RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 TAF8Q7Z7C8 310 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 TRIM74Q86UV6 250 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 GKN2Q86XP6 184 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CREG2Q8IUH2 290 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 SFTPA2Q8IWL1 248 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 FSTL5Q8N475 847 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CCL4L1Q8NHW4 92 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 MAPK15Q8TD08 544 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 ACTRT1Q8TDG2 376 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 COG1Q8WTW3 980 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms