RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 TCRBV5S2A0A599 114 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 PAGE1O75459 146 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 ZNF189O75820 626 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 F9P00740 461 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 HGFP14210 728 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 GSK3BP49841 420 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 CLCNKBP51801 687 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 HERVK_113P63132 956 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 PFKFB4Q16877 469 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 PAN2Q504Q3 1202 aaKnown RBP11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 PAGE3Q5JUK9 113 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 ANKRD26P1Q6NSI1 321 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 CLYBLQ8N0X4 340 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 MINDY1Q8N5J2 469 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 ZBTB8BQ8NAP8 495 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 EMID1Q96A84 441 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 TMEM125Q96AQ2 219 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 PPP1R14BQ96C90 147 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 TUBGCP3Q96CW5 907 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 VPS50Q96JG6 964 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 SLC30A3Q99726 388 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 ERVK-6Q9BXR3 956 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 SLC52A3Q9NQ40 469 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 TBC1D23Q9NUY8 699 aa11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 SMPD3Q9NY59 655 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-203ENST00000462146 BBIP1A8MTZ0 92 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 K7EPI3 171 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 ZNF701M0R085 212 aaPredicted RBP11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 BAIAP3O94812 1187 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 FUCA1P04066 466 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 RFC2P35250 354 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 CAPGP40121 348 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 CASP2P42575 452 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 TIAL1Q01085 375 aaKnown RBP eCLIP11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 ITKQ08881 620 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 TRAF2Q12933 501 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 SLC14A2Q15849 920 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 SLC44A4Q53GD3 710 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 KDELC1Q6UW63 502 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 SCIMPQ6UWF3 145 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 C14orf80Q86SX3 495 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 DHRSXQ8N5I4 330 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 NAT16Q8N8M0 369 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 TRPV3Q8NET8 790 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 PTCD2Q8WV60 388 aaKnown RBP11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 MYLPFQ96A32 169 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 HOPXQ9BPY8 73 aaPredicted RBP11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 SYT17Q9BSW7 474 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 VTA1Q9NP79 307 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 NT5MQ9NPB1 228 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 TIMM22Q9Y584 194 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 MAGED1Q9Y5V3 778 aaPredicted RBP11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 MYO16Q9Y6X6 1858 aa11.71□□□□□ -0.53
PDZRN3-203ENST00000462146 KANSL1LA0AUZ9 987 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 S1PR4O95977 384 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 PRSS56P0CW18 603 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 CD1DP15813 335 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 CD86P42081 329 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 RPS9P46781 194 aaKnown RBP11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 MLLT10P55197 1068 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 C21orf59P57076 290 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 GNA12Q03113 381 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 PLA2G4EQ3MJ16 856 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 OTUD3Q5T2D3 398 aaPredicted RBP11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 ZNF549Q6P9A3 640 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 DCDC5Q6ZRR9 648 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 KIAA0408Q6ZU52 694 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 ACDQ96AP0 544 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 PABPC5Q96DU9 382 aaKnown RBP11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 ERLEC1Q96DZ1 483 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 PPP1R10Q96QC0 940 aaKnown RBP11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 MTG1Q9BT17 334 aaPredicted RBP11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 TRIM15Q9C019 465 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 ALG2Q9H553 416 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 LTB4R2Q9NPC1 389 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 PFDN4Q9NQP4 134 aa11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 IFT80Q9P2H3 777 aaPredicted RBP11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 EVLQ9UI08 416 aaPredicted RBP11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 OAS3Q9Y6K5 1087 aaKnown RBP11.71□□□□□ -0.54
PDZRN3-203ENST00000462146 H0Y858 1186 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 AZIN1O14977 448 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TREHO43280 583 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 KCNH1O95259 989 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 AXLP30530 894 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 SHMT2P34897 504 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 BMXP51813 675 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 DSC2Q02487 901 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 ZNF829Q3KNS6 432 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TMTC4Q5T4D3 741 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TWF2Q6IBS0 349 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TMEM214Q6NUQ4 689 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 CCDC117Q8IWD4 279 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 CENPSQ8N2Z9 138 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 SLC15A4Q8N697 577 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 NUDT8Q8WV74 236 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 BORCS5Q969J3 196 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 COX4I2Q96KJ9 171 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 FCRL2Q96LA5 508 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TLR9Q9NR96 1032 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms