RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 POLD3Q15054 466 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PRKD1Q15139 912 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 DLGAP5Q15398 846 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 TAF5Q15542 800 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 NPTX1Q15818 432 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CYP2A13Q16696 494 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 KYAT1Q16773 422 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SMTNL2Q2TAL5 461 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SMU1Q2TAY7 513 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ADCK5Q3MIX3 580 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 AGBL4Q5VU57 503 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CLEC6AQ6EIG7 209 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 DPY19L2P1Q6NXN4 242 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SLC36A4Q6YBV0 504 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 Q6ZSN1 163 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 TMCO2Q7Z6W1 182 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 FAM228AQ86W67 206 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CACNA2D3Q8IZS8 1091 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 KIRREL3Q8IZU9 778 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ELMOD1Q8N336 334 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 TCP11L2Q8N4U5 519 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CPSF7Q8N684 471 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SETD9Q8NE22 299 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 BBS1Q8NFJ9 593 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CMASQ8NFW8 434 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 OR13C2Q8NGS9 318 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 LHFPL5Q8TAF8 219 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PHOSPHO1Q8TCT1 267 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SLC2A14Q8TDB8 520 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SETD7Q8WTS6 366 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 LIPHQ8WWY8 451 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 HTRA1Q92743 480 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CELF1Q92879 486 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 EXTL1Q92935 676 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 HSPBAP1Q96EW2 488 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF764Q96H86 408 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CLUHP3Q96NS8 147 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 LRRC37BQ96QE4 947 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PRAM1Q96QH2 718 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ADOQ96SZ5 270 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 NEU1Q99519 415 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZFYVE21Q9BQ24 234 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 JAM3Q9BX67 310 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 LRMDAQ9H2I8 198 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 DPEP3Q9H4B8 488 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 KRT84Q9NSB2 600 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 DECR2Q9NUI1 292 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 HYPKQ9NX55 129 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 UGGT1Q9NYU2 1555 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 AFF4Q9UHB7 1163 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CYB5R1Q9UHQ9 305 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 BAIAP2L1Q9UHR4 511 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 LNPEPQ9UIQ6 1025 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CNOT7Q9UIV1 285 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SERPINB13Q9UIV8 391 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 TSPYL4Q9UJ04 414 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CAPN11Q9UMQ6 739 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PCDHGB4Q9UN71 923 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PCDHA12Q9UN75 941 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZFR2Q9UPR6 939 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PCDHGA3Q9Y5H0 932 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PLEKHH1Q9ULM0 1364 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 KIDINS220Q9ULH0 1771 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 COL16A1Q07092 1604 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 NKTRP30414 1462 aaKnown RBP4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 GRIN2DO15399 1336 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 PDS5AQ29RF7 1337 aaKnown RBP4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 PCDH11XQ9BZA7 1347 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 PCDH11YQ9BZA8 1340 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 OR5K3A6NET4 321 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 FBP2O00757 339 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF197O14709 1029 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 RASGRF2O14827 1237 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 PLD2O14939 933 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 KIAA0355O15063 1070 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 ALOX15BO15296 676 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 RNMTO43148 476 aaKnown RBP4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 TBX10O75333 385 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 JRKO75564 520 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 SUN1O94901 812 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 PLEKHA8P1O95397 391 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 GJB6O95452 261 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 IL1AP01583 271 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 HMGCRP04035 888 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 ITGA2BP08514 1039 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 TFPTP0C1Z6 253 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 DARSP14868 501 aaKnown RBP4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 NPR1P16066 1061 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 SDSP20132 328 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 CYP2B6P20813 491 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 PKLRP30613 574 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 CRKLP46109 303 aaKnown RBP4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 ALDH7A1P49419 539 aaKnown RBP4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 ATXN3P54252 364 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 DGCR2P98153 550 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 TLE2Q04725 743 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 GAD2Q05329 585 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 PTPRRQ15256 657 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 CYTH1Q15438 398 aa4.75□□□□□ -1.65
HMGB3P9-201ENST00000441799 SMAD2Q15796 467 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms