RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 RNPEPL1Q9HAU8 725 aa14.01□□□□□ -0.17
SCAF4-202ENST00000399804 POLR3BQ9NW08 1133 aaPredicted RBP14.01□□□□□ -0.17
SCAF4-202ENST00000399804 SH3BGRLO75368 114 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 SEC22BO75396 215 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 ME2P23368 584 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 GMPRP36959 345 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 KLF10Q13118 480 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 CES5AQ6NT32 575 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 DOK6Q6PKX4 331 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 RBM15BQ8NDT2 890 aaKnown RBP14□□□□□ -0.17
SCAF4-202ENST00000399804 ZCCHC2Q9C0B9 1178 aaKnown RBP14□□□□□ -0.17
SCAF4-202ENST00000399804 WDR41Q9HAD4 459 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 SLC28A3Q9HAS3 691 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 IRAK4Q9NWZ3 460 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 PAPPA2Q9BXP8 1791 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 ANKRD66B4E2M5 251 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 GSC2O15499 205 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 MLYCDO95822 493 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 ADH1CP00326 375 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 ALPIP09923 528 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 LINC00032P0C843 101 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 PIK3R1P27986 724 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 HIST2H2ACQ16777 129 aaPredicted RBP14□□□□□ -0.17
SCAF4-202ENST00000399804 HIST2H2AA3Q6FI13 130 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 TRIML2Q8N7C3 387 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 CATSPER1Q8NEC5 780 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 DENND1AQ8TEH3 1009 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 ESAMQ96AP7 390 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 MFSD1Q9H3U5 465 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 TMEM30AQ9NV96 361 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 ZNHIT2Q9UHR6 403 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 A8MUI8 341 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 KDELR3O43731 214 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 POP4O95707 220 aaKnown RBP14□□□□□ -0.17
SCAF4-202ENST00000399804 CACNG1Q06432 222 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 TSNQ15631 228 aaKnown RBP14□□□□□ -0.17
SCAF4-202ENST00000399804 AASDHQ4L235 1098 aaPredicted RBP14□□□□□ -0.17
SCAF4-202ENST00000399804 CLEC6AQ6EIG7 209 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 CPNE9Q8IYJ1 553 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 FAM13CQ8NE31 585 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 RCN3Q96D15 328 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 MTFMTQ96DP5 389 aaKnown RBP14□□□□□ -0.17
SCAF4-202ENST00000399804 C11orf84Q9BUA3 381 aaPredicted RBP14□□□□□ -0.17
SCAF4-202ENST00000399804 ASPSCR1Q9BZE9 553 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 UBXN8O00124 270 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 PER2O15055 1255 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 PSRC1Q6PGN9 363 aaPredicted RBP14□□□□□ -0.17
SCAF4-202ENST00000399804 GPRIN3Q6ZVF9 776 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 SERPINA9Q86WD7 417 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 PYDC1Q8WXC3 89 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 DPY30Q9C005 99 aa14□□□□□ -0.17
SCAF4-202ENST00000399804 EVPLLA8MZ36 301 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 INPP4BO15327 924 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 VCLP18206 1134 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 OGNP20774 298 aaKnown RBP13.99□□□□□ -0.17
SCAF4-202ENST00000399804 ARHGDIAP52565 204 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 SLC34A1Q06495 639 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 NIPAL4Q0D2K0 466 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 PAQR3Q6TCH7 311 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 C6orf89Q6UWU4 347 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 GET4Q7L5D6 327 aaPredicted RBP13.99□□□□□ -0.17
SCAF4-202ENST00000399804 POF1BQ8WVV4 589 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 JADE3Q92613 823 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 NT5C3BQ969T7 300 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 SNX13Q9Y5W8 968 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 ARHGAP10A1A4S6 786 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 CATP04040 527 aaKnown RBP13.99□□□□□ -0.17
SCAF4-202ENST00000399804 EPB42P16452 691 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 UGT1A6P19224 532 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 UGT1A1P22309 533 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 UGT1A4P22310 534 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 UGT1A3P35503 534 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 UGT1A5P35504 534 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 SPAM1P38567 509 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 CYP2R1Q6VVX0 501 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 DNAJC14Q6Y2X3 702 aaPredicted RBP13.99□□□□□ -0.17
SCAF4-202ENST00000399804 VPS37AQ8NEZ2 397 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 OVCA2Q8WZ82 227 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 PSKH2Q96QS6 385 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 RUBCNLQ9H714 662 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 LNPEPQ9UIQ6 1025 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 TIMM22Q9Y584 194 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 SDK1Q7Z5N4 2213 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 ELFN1P0C7U0 828 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 IDH3AP50213 366 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 DEFB103AP81534 67 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 CAMK2GQ13555 558 aaPredicted RBP13.99□□□□□ -0.17
SCAF4-202ENST00000399804 CYS1Q717R9 158 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 PIM3Q86V86 326 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 CHPFQ8IZ52 775 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 CCDC138Q96M89 665 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 KLHL32Q96NJ5 620 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 OXSMQ9NWU1 459 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 CD84Q9UIB8 345 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 PCDHB1Q9Y5F3 818 aa13.99□□□□□ -0.17
SCAF4-202ENST00000399804 DOCK3Q8IZD9 2030 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 DOCK5Q9H7D0 1870 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 TMEM247A6NEH6 219 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 KRT36O76013 467 aa13.98□□□□□ -0.17
SCAF4-202ENST00000399804 EPOP01588 193 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms