RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 MSX2P35548 267 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 IDH3AP50213 366 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 FSTL1Q12841 308 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 TCEAL1Q15170 157 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 MTSS1LQ765P7 747 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 TRMT11Q7Z4G4 463 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 NELL1Q92832 810 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 MYLPFQ96A32 169 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 REXO5Q96IC2 774 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 ADAM2Q99965 735 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 SLC7A5P2Q9GIP4 190 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 ZNF214Q9UL59 606 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 SAMD4AQ9UPU9 718 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 MAFBQ9Y5Q3 323 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 NFS1Q9Y697 457 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 CARNS1A5YM72 827 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 TBX10O75333 385 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 CNPP09543 421 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 L1CAMP32004 1257 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 VEGFBP49765 207 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 GSCP56915 257 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 YBEYP58557 167 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 COX10Q12887 443 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 PLD1Q13393 1074 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 SEMA5AQ13591 1074 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 GRM3Q14832 879 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 ACAP2Q15057 778 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 PRKD1Q15139 912 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 ANGPT1Q15389 498 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 LSM12Q3MHD2 195 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 HECTD3Q5T447 861 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 HECTD2Q5U5R9 776 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 DCAF12L1Q5VU92 463 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 GLYATQ6IB77 296 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 FSTL4Q6MZW2 842 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 MZT2AQ6P582 158 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 TRIM48Q8IWZ4 208 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 UNC5BQ8IZJ1 945 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 TFAP2BQ92481 460 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 PPP1R14BQ96C90 147 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 NXNL1Q96CM4 212 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 OR52E6Q96RD3 313 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 KCTD15Q96SI1 283 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 CIPCQ9C0C6 399 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 CHRAC1Q9NRG0 131 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 ABCB10Q9NRK6 738 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 IGSF9Q9P2J2 1179 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 SLC7A8Q9UHI5 535 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 DNMT3LQ9UJW3 386 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 G3V2T6 193 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 RFXANKO14593 260 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 UGT2B11O75310 529 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 WBP4O75554 376 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 NTRK1P04629 796 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 IL12AP29459 219 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 ADGRE1Q14246 886 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 DEFB115Q30KQ5 88 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 PPM1JQ5JR12 505 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 DAW1Q8N136 415 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 LRRN4Q8WUT4 740 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 IRGQQ8WZA9 623 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 EZH1Q92800 747 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 MCRS1Q96EZ8 462 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 FBXL18Q96ME1 805 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 GPR20Q99678 358 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 SPATA5L1Q9BVQ7 753 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 NLNQ9BYT8 704 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 APOBEC3GQ9HC16 384 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 ZFP14Q9HCL3 533 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 RBPJLQ9UBG7 517 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 AJAP1Q9UKB5 411 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 SH3GLB1Q9Y371 365 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 WASF2Q9Y6W5 498 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 TAF4O00268 1085 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 TMEM63AO94886 807 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 LRIG2O94898 1065 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 IL6P05231 212 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 CD48P09326 243 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 ZBTB48P10074 688 aaPredicted RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 DBTP11182 482 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 CXCR2P25025 360 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 CAPZA2P47755 286 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 ARL4DP49703 201 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 NUMBP49757 651 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 RPS6KA3P51812 740 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 HSPA14Q0VDF9 509 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 HERC3Q15034 1050 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 PMF1Q6P1K2 205 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 CCDC149Q6ZUS6 474 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 CCDC80Q76M96 950 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 RELL1Q8IUW5 271 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 RBFAQ8N0V3 343 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 SPATA6LQ8N4H0 392 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 PCDH19Q8TAB3 1148 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 UBASH3BQ8TF42 649 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 VPS35Q96QK1 796 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 BBS4Q96RK4 519 aa8.37□□□□□ -1.07
VPS36-201ENST00000378060 TDRD1Q9BXT4 1180 aaKnown RBP8.37□□□□□ -1.07
VPS36-201ENST00000378060 XPNPEP1Q9NQW7 623 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms