RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 HERC6Q8IVU3 1022 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 MIER2Q8N344 545 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 LEMD2Q8NC56 503 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 PAPD5Q8NDF8 572 aaKnown RBP10.05□□□□□ -0.8
USP11-203ENST00000377080 TRPV1Q8NER1 839 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 TSPAN14Q8NG11 270 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 ZFP28Q8NHY6 868 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 ARRDC2Q8TBH0 407 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 BRSK1Q8TDC3 778 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 TFAP2CQ92754 450 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 USP13Q92995 863 aaPredicted RBP10.05□□□□□ -0.8
USP11-203ENST00000377080 POP5Q969H6 163 aaKnown RBP10.05□□□□□ -0.8
USP11-203ENST00000377080 SLCO4A1Q96BD0 722 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 C19orf60Q96EN9 201 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 TMA16Q96EY4 203 aaKnown RBP10.05□□□□□ -0.8
USP11-203ENST00000377080 ZNF419Q96HQ0 510 aaPredicted RBP10.05□□□□□ -0.8
USP11-203ENST00000377080 CEP295NLQ96MC4 621 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 ZCWPW1Q9H0M4 648 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 COQ10BQ9H8M1 238 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 TMLHEQ9NVH6 421 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 ACTR3BQ9P1U1 418 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 MYRFQ9Y2G1 1151 aa10.05□□□□□ -0.8
USP11-203ENST00000377080 TIMM13Q9Y5L4 95 aaPredicted RBP10.05□□□□□ -0.8
USP11-203ENST00000377080 IFRD1O00458 451 aaPredicted RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 AZIN1O14977 448 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 RPP40O75818 363 aaKnown RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 GLP2RO95838 553 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 EOMESO95936 686 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 IGLV3-27P01718 113 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 ATXN1LP0C7T5 689 aaKnown RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 PRR35P0CG20 571 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 CD1EP15812 388 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 PCSK2P16519 638 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 HOXB6P17509 224 aaKnown RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 KCNA5P22460 613 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 IGFBP6P24592 240 aaPredicted RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 CDK9P50750 372 aaKnown RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 SLC5A3P53794 718 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 TBX4P57082 545 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 PRAMEP78395 509 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 CDKL1Q00532 357 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 SMARCB1Q12824 385 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 SERINC3Q13530 473 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 TRIP4Q15650 581 aaPredicted RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 MAP7D1Q3KQU3 841 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 AASDHQ4L235 1098 aaPredicted RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 NHSL2Q5HYW2 709 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 RBM20Q5T481 1227 aaKnown RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 KLHDC10Q6PID8 442 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 DHRS4L2Q6PKH6 230 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 CYHR1Q6ZMK1 362 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 GK5Q6ZS86 529 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 ARHGAP22Q7Z5H3 698 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 FUNDC1Q8IVP5 155 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 PCDH20Q8N6Y1 951 aaKnown RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 TNIP2Q8NFZ5 429 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 OR10T2Q8NGX3 314 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 STAG3L4Q8TBR4 150 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 KIAA1191Q96A73 305 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 CNDP2Q96KP4 475 aaKnown RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 BTN2A3PQ96KV6 586 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 GAS2L1Q99501 681 aaPredicted RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 C19orf43Q9BQ61 176 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 LRFN3Q9BTN0 628 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 C9orf16Q9BUW7 83 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 TRIM54Q9BYV2 358 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 DERL2Q9GZP9 239 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 ZNF576Q9H609 170 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 CLK4Q9HAZ1 481 aaKnown RBP10.04□□□□□ -0.8
USP11-203ENST00000377080 COMMD10Q9Y6G5 202 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 CEPT1Q9Y6K0 416 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 CHD5Q8TDI0 1954 aa10.04□□□□□ -0.8
USP11-203ENST00000377080 A0A087WXM4 84 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 TTC24A2A3L6 582 aaPredicted RBP10.03□□□□□ -0.8
USP11-203ENST00000377080 LCHNA4D1U4 455 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 C7orf72A4D263 438 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 CASTOR2A6NHX0 329 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 MEIS3P2A8K0S8 358 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 SYCE1LA8MT33 242 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 TMEM233B4DJY2 109 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 UBFD1O14562 309 aaKnown RBP10.03□□□□□ -0.8
USP11-203ENST00000377080 CD3EAPO15446 510 aaKnown RBP10.03□□□□□ -0.8
USP11-203ENST00000377080 KERAO60938 352 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 SUPT7LO94864 414 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 MYCNP04198 464 aaPredicted RBP10.03□□□□□ -0.8
USP11-203ENST00000377080 CDH2P19022 906 aaPredicted RBP10.03□□□□□ -0.8
USP11-203ENST00000377080 MYF6P23409 242 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 GRIK1P39086 918 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 NME5P56597 212 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 EEFSECP57772 596 aaKnown RBP10.03□□□□□ -0.8
USP11-203ENST00000377080 YWHAHQ04917 246 aaPredicted RBP10.03□□□□□ -0.8
USP11-203ENST00000377080 SLC10A7Q0GE19 358 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 SEPT6Q14141 434 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 ZNF460Q14592 562 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 MYLK3Q32MK0 819 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.03□□□□□ -0.8
USP11-203ENST00000377080 SIRPB2Q5JXA9 342 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 C6orf10Q5SRN2 563 aa10.03□□□□□ -0.8
USP11-203ENST00000377080 C6orf52Q5T4I8 152 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms