RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 STARD3Q14849 445 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 NEDD8Q15843 81 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 MS4A13Q5J8X5 152 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 NAPRTQ6XQN6 538 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 SPPL2CQ8IUH8 684 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 SLC44A2Q8IWA5 706 aaPredicted RBP8.45□□□□□ -1.06
PTPRK-206ENST00000368215 FBXO22Q8NEZ5 403 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 CLHC1Q8NHS4 586 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 FUBP3Q96I24 572 aaKnown RBP eCLIP8.45□□□□□ -1.061e-6■■□□□ 12.9
PTPRK-206ENST00000368215 DHRS4Q9BTZ2 278 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 KIFC1Q9BW19 673 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 TNKS2Q9H2K2 1166 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 HIPK3Q9H422 1215 aa8.45□□□□□ -1.06
PTPRK-206ENST00000368215 COPG1Q9Y678 874 aaKnown RBP8.45□□□□□ -1.06
PTPRK-206ENST00000368215 MYO9BQ13459 2157 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 C15orf38-AP3S2A0A0A6YYH1 394 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 SLC38A8A6NNN8 435 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 INSIG1O15503 277 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 MLYCDO95822 493 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 DGKAP23743 735 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 OCA2Q04671 838 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 GSTA3Q16772 222 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ARHGAP15Q53QZ3 475 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 REP15Q6BDI9 236 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 PAQR3Q6TCH7 311 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 LPCAT2Q7L5N7 544 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ARPINQ7Z6K5 226 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 C11orf96Q7Z7L8 435 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 TMEM135Q86UB9 458 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 SERINC5Q86VE9 423 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 CNTD1Q8N815 330 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 SIDT2Q8NBJ9 832 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ZMIZ2Q8NF64 920 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ITFG1Q8TB96 612 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 BRSK1Q8TDC3 778 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 SELENOMQ8WWX9 145 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ARNTL2Q8WYA1 636 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 UTP4Q969X6 686 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 PPM1MQ96MI6 270 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 TRAPPC9Q96Q05 1148 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 NR1H4Q96RI1 486 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 WDR83Q9BRX9 315 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 WDR6Q9NNW5 1121 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 NDUFA13Q9P0J0 144 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 GIMAP2Q9UG22 337 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 MYRFQ9Y2G1 1151 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 DHRS12A0PJE2 317 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 LZTS3O60299 673 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 VPS4BO75351 444 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ABCB1P08183 1280 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 DHRS4L1P0CG22 281 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 TAZQ16635 292 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 FAM98BQ52LJ0 330 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ANO7Q6IWH7 933 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 EPGNQ6UW88 154 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 RALGPS2Q86X27 583 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 RASAL3Q86YV0 1011 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 NAT14Q8WUY8 206 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 KHSRPQ92945 711 aaKnown RBP eCLIP8.44□□□□□ -1.062e-6■■□□□ 14.1
PTPRK-206ENST00000368215 RPL10LQ96L21 214 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 COMMD8Q9NX08 183 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ANAPC2Q9UJX6 822 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 TMEM247A6NEH6 219 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 C16orf96A6NNT2 1141 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 PRMT5O14744 637 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 FAM163BP0C2L3 166 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 GSSP48637 474 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 PRKG2Q13237 762 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 CEP97Q8IW35 865 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ARL14EPQ8N8R7 260 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 TXNDC5Q8NBS9 432 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ACTRT2Q8TDY3 377 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 EIF2B4Q9UI10 523 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 POLR3HQ9Y535 204 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ANKRD12Q6UB98 2062 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 KPNA3O00505 521 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 NPHS1O60500 1241 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 DNAJA2O60884 412 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 NIPSNAP2O75323 286 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 ULK1O75385 1050 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 CNPP09543 421 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 MSH3P20585 1137 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 POLD2P49005 469 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 PABPC1LQ4VXU2 614 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 STEAP4Q687X5 459 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 MSANTD2Q6P1R3 559 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 CLVS1Q8IUQ0 354 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 TAGAPQ8N103 731 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 DHRSXQ8N5I4 330 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 HJURPQ8NCD3 748 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 VPS37AQ8NEZ2 397 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 LRTOMTQ8WZ04 291 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 BDH2Q9BUT1 245 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 CCDC106Q9BWC9 280 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 EMILIN2Q9BXX0 1053 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 MAGEH1Q9H213 219 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 FBRSL1Q9HCM7 1045 aaKnown RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 SH3BP4Q9P0V3 963 aa8.44□□□□□ -1.06
PTPRK-206ENST00000368215 LEF1Q9UJU2 399 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-206ENST00000368215 SLC13A4Q9UKG4 626 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms