RNA–Protein interactions for RNA: ENST00000363192.1

RNU4-58P-201, Transcript of RNA, U4 small nuclear 58, pseudogene, humanhuman

BASIC

Gene RNU4-58P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-58P-201ENST00000363192 SH2B2O14492 632 aaPredicted RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 SEPT4O43236 478 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 FAM155BO75949 473 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 MOCS3O95396 460 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 FTCDO95954 541 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 TPOP07202 933 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 ETFAP13804 333 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 ACADSP16219 412 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 TYMPP19971 482 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 CST5P28325 142 aaPredicted RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 BDKRB2P30411 391 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 HOXA13P31271 388 aaPredicted RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 CEACAM8P31997 349 aaPredicted RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 SHMT1P34896 483 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 TECP42680 631 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 ARCN1P48444 511 aaKnown RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 MCM2P49736 904 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 AK2P54819 239 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 EEF1A1P68104 462 aaKnown RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 PDE1BQ01064 536 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 PPARDQ03181 441 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 CHRNDQ07001 517 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 HLTFQ14527 1009 aaKnown RBP eCLIP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 UGP2Q16851 508 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 KIAA1644Q3SXP7 199 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 TUBB8Q3ZCM7 444 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 GLIPR1L2Q4G1C9 344 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 EEF1A1P5Q5VTE0 462 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 DMKNQ6E0U4 476 aaPredicted RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 OR7E24Q6IFN5 339 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 DENND1BQ6P3S1 775 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 GGT6Q6P531 493 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 KCTD18Q6PI47 426 aaPredicted RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 BHLHB9Q6PI77 547 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 BRAT1Q6PJG6 821 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 Q6ZR54 194 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 LINGO2Q7L985 606 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 KRTAP11-1Q8IUC1 163 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 CCDC117Q8IWD4 279 aaPredicted RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 KIAA2013Q8IYS2 634 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 CPXM2Q8N436 756 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 LSM14AQ8ND56 463 aaKnown RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 RBM15BQ8NDT2 890 aaKnown RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 ACVR1CQ8NER5 493 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 BEST2Q8NFU1 509 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 OR6Y1Q8NGX8 325 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 CSGALNACT1Q8TDX6 532 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 SLC38A5Q8WUX1 472 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 FBXL8Q96CD0 374 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 LINGO1Q96FE5 620 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 GMPPAQ96IJ6 420 aaPredicted RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 IWS1Q96ST2 819 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 MTERF1Q99551 399 aaKnown RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 NEURL2Q9BR09 285 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 EPHX3Q9H6B9 360 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 PPP1R3EQ9H7J1 279 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 UPF2Q9HAU5 1272 aaKnown RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 SIX2Q9NPC8 291 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 ZNF71Q9NQZ8 489 aaPredicted RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 SRP68Q9UHB9 627 aaKnown RBP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 RCOR1Q9UKL0 485 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 ACSL5Q9ULC5 683 aa0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP0.65□□□□□ -2.31
RNU4-58P-201ENST00000363192 PTPRCP08575 1304 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 A0A0G2JLW4 131 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 A0A1W2PP11 408 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 A0A1W2PPI3 338 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 A0A1W2PPR1 153 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 TMEM202A6NGA9 273 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 A6NL46 340 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 MAGEB17A8MXT2 336 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 EPM2AB3EWF7 344 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 KRTAP4-16G5E9R7 235 aaPredicted RBP0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 STX16-NPEPL1H3BU86 382 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 TAF4O00268 1085 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 STX16O14662 325 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 PER2O15055 1255 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 EIF3DO15371 548 aaKnown RBP eCLIP0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 CEP104O60308 925 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 TCEA3O75764 348 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 KRT38O76015 456 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 WISP2O76076 250 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 CLPTM1O96005 669 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 PRB2P02812 416 aaPredicted RBP0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 HEXAP06865 529 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 FAM157CP0CG43 387 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 IGHV4-38-2P0DP08 117 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 PCNAP12004 261 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 TNNT1P13805 278 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 VEGFAP15692 232 aaPredicted RBP0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 DDX5P17844 614 aaKnown RBP0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 POLR2CP19387 275 aaPredicted RBP0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 MSH3P20585 1137 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 RRM1P23921 792 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 AHRP35869 848 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 FASLGP48023 281 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 NR2C2P49116 596 aa0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 METAP2P50579 478 aaKnown RBP eCLIP0.64□□□□□ -2.31
RNU4-58P-201ENST00000363192 BMXP51813 675 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms