RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 LPOP22079 712 aaPredicted RBP14.67□□□□□ -0.06
CXCL12-201ENST00000343575 ALDH3A1P30838 453 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 HMGCLP35914 325 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 WASP42768 502 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 SLC18A1P54219 525 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 SEC13P55735 322 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 IL9RQ01113 521 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 ELAVL3Q14576 367 aaKnown RBP14.67□□□□□ -0.06
CXCL12-201ENST00000343575 TAF11Q15544 211 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 UGP2Q16851 508 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 C2orf27AQ580R0 203 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 ZNF805Q5CZA5 627 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 WASHC2DQ5SRD0 308 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 CRTC1Q6UUV9 634 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 TRABD2AQ86V40 505 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 NAF1Q96HR8 494 aaKnown RBP14.67□□□□□ -0.06
CXCL12-201ENST00000343575 C8orf33Q9H7E9 229 aaPredicted RBP14.67□□□□□ -0.06
CXCL12-201ENST00000343575 SLC24A3Q9HC58 644 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 BPIFA1Q9NP55 256 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 SLC2A4RGQ9NR83 387 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 POLR3BQ9NW08 1133 aaPredicted RBP14.67□□□□□ -0.06
CXCL12-201ENST00000343575 HACD3Q9P035 362 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 MARCH4Q9P2E8 410 aaPredicted RBP14.67□□□□□ -0.06
CXCL12-201ENST00000343575 DKK3Q9UBP4 350 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 TRIOO75962 3097 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 CCDC162PA2VCL2 907 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 C2orf81A6NN90 581 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 C16orf96A6NNT2 1141 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 RPP40O75818 363 aaKnown RBP14.67□□□□□ -0.06
CXCL12-201ENST00000343575 DCTN3O75935 186 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 GOT2P00505 430 aaKnown RBP14.67□□□□□ -0.06
CXCL12-201ENST00000343575 FESP07332 822 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 INHBAP08476 426 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 SRFP11831 508 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 CALB2P22676 271 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 TIE1P35590 1138 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 PTSQ03393 145 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 CTBP1Q13363 440 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 TDGQ13569 410 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 ZNF789Q5FWF6 425 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 NEPROQ6NW34 567 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 BRAT1Q6PJG6 821 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 RGS9BPQ6ZS82 235 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 SH2D5Q6ZV89 423 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 FITM2Q8N6M3 262 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 TMIEQ8NEW7 156 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 CDKL2Q92772 493 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 OSBPL1AQ9BXW6 950 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 MFSD1Q9H3U5 465 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 TRABDQ9H4I3 376 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 RNPEPL1Q9HAU8 725 aa14.67□□□□□ -0.06
CXCL12-201ENST00000343575 GAPDHSO14556 408 aaPredicted RBP14.66□□□□□ -0.06
CXCL12-201ENST00000343575 SPINT1O43278 529 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 ADAM23O75077 832 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 SLC4A1P02730 911 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 AHSGP02765 367 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 PRSS56P0CW18 603 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 BRAFP15056 766 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 PAMP19021 973 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 ABCG1P45844 678 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 XIAPP98170 497 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 NAB1Q13506 487 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 PEX6Q13608 980 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 LAMB3Q13751 1172 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 BMPR2Q13873 1038 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 SEMA3AQ14563 771 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 RBBP5Q15291 538 aaKnown RBP14.66□□□□□ -0.06
CXCL12-201ENST00000343575 TPRG1Q6ZUI0 275 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 NUDT18Q6ZVK8 323 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 PARS2Q7L3T8 475 aaKnown RBP14.66□□□□□ -0.06
CXCL12-201ENST00000343575 PTAR1Q7Z6K3 402 aaPredicted RBP14.66□□□□□ -0.06
CXCL12-201ENST00000343575 CHPFQ8IZ52 775 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 IL17RCQ8NAC3 791 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 ACVR1CQ8NER5 493 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 PIP4K2CQ8TBX8 421 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 HCAR2Q8TDS4 363 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 OR8D1Q8WZ84 308 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 ARRDC3Q96B67 414 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 CPNE1Q99829 537 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 ZFYVE1Q9HBF4 777 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 KCNK9Q9NPC2 374 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 B4GALT6Q9UBX8 382 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 FKBPLQ9UIM3 349 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 USH1CQ9Y6N9 552 aa14.66□□□□□ -0.06
CXCL12-201ENST00000343575 C1orf232A0A0U1RR37 186 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 NEFHP12036 1026 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 CD72P21854 359 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 SLC1A2P43004 574 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 MPP1Q00013 466 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 CAMK2GQ13555 558 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 TSNAXIP1Q2TAA8 658 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 PUS10Q3MIT2 529 aaKnown RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 SLC44A4Q53GD3 710 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 AP1ARQ63HQ0 302 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 LRRC66Q68CR7 880 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 KIAA1211LQ6NV74 962 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 RFLNAQ6ZTI6 216 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 STRA8Q7Z7C7 330 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 LDB1Q86U70 411 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 ENDOVQ8N8Q3 282 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms