RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 RASSF6Q6ZTQ3 369 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 FCRL2Q96LA5 508 aaPredicted RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 ELOVL2Q9NXB9 296 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 EVLQ9UI08 416 aaPredicted RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 PACSIN3Q9UKS6 424 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 DHRS7Q9Y394 339 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 SAMHD1Q9Y3Z3 626 aaKnown RBP11.08□□□□□ -0.64
KNOP1-201ENST00000219837 PPLO60437 1756 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 TRIM38O00635 465 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 SUV39H1O43463 412 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 C9P02748 559 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 SLC26A3P40879 764 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 PPIGQ13427 754 aaKnown RBP eCLIP11.08□□□□□ -0.642e-6■□□□□ 9.3
KNOP1-201ENST00000219837 CPTPQ5TA50 214 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 FAM91A1Q658Y4 838 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 LIN54Q6MZP7 749 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 TNS4Q8IZW8 715 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 C1QTNF1Q9BXJ1 281 aa11.08□□□□□ -0.64
KNOP1-201ENST00000219837 TRBC1P01850 177 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 FGF1P05230 155 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 PDHA2P29803 388 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 PSME3P61289 254 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 CDK18Q07002 472 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 SPESP1Q6UW49 350 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 LINGO4Q6UY18 593 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 OTOP3Q7RTS5 596 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 CAMK1DQ8IU85 385 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 TRIM63Q969Q1 353 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 ABI3Q9P2A4 366 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 PCDHGB3Q9Y5G1 929 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 CYP3A7-CYP3A51PA0A087WV96 503 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 ITGA2BP08514 1039 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 DBTP11182 482 aaKnown RBP11.07□□□□□ -0.64
KNOP1-201ENST00000219837 CYP3A7P24462 503 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 STARP49675 285 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 CASP9P55211 416 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 SPDYCQ5MJ68 293 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 FKBP1CQ5VVH2 108 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 IRGCQ6NXR0 463 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 GALNT5Q7Z7M9 940 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 VSIG10LQ86VR7 867 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 ATCAYQ86WG3 371 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 SYNPO2Q9UMS6 1093 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 KIF1AQ12756 1690 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 hCG_1818297A0A087WSY0 165 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 FSBPO95073 299 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 CHN2P52757 468 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 NT5DC1Q5TFE4 455 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 CXorf57Q6NSI4 855 aaKnown RBP11.07□□□□□ -0.64
KNOP1-201ENST00000219837 ABRAXAS1Q6UWZ7 409 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 GPR180Q86V85 440 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 CIR1Q86X95 450 aaPredicted RBP11.07□□□□□ -0.64
KNOP1-201ENST00000219837 PLEKHG4BQ96PX9 1271 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 RNF121Q9H920 327 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 EXD2Q9NVH0 621 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 SSR3Q9UNL2 185 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 BCL9O00512 1426 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 A0A087WXM4 84 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 LYPLA1O75608 230 aaPredicted RBP11.07□□□□□ -0.64
KNOP1-201ENST00000219837 SPAM1P38567 509 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 SP2Q02086 613 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 FOXM1Q08050 763 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 GRSF1Q12849 480 aaKnown RBP eCLIP11.07□□□□□ -0.64
KNOP1-201ENST00000219837 TAF10Q12962 218 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 BEND5Q7L4P6 421 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 PHF13Q86YI8 300 aaPredicted RBP11.07□□□□□ -0.64
KNOP1-201ENST00000219837 CFAP206Q8IYR0 622 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 TCAIMQ8N3R3 496 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 ZCCHC10Q8TBK6 192 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 AENQ8WTP8 325 aaKnown RBP11.07□□□□□ -0.64
KNOP1-201ENST00000219837 QKIQ96PU8 341 aaKnown RBP eCLIP11.07□□□□□ -0.64
KNOP1-201ENST00000219837 SLC4A9Q96Q91 983 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 TRMT13Q9NUP7 481 aaKnown RBP11.07□□□□□ -0.64
KNOP1-201ENST00000219837 CKLFQ9UBR5 152 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 RGSL1A5PLK6 1076 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 AZIN1O14977 448 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 IDO1P14902 403 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 QPRTQ15274 297 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 GRIK5Q16478 980 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 PARP15Q460N3 678 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 BRMS1LQ5PSV4 323 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 MSANTD2Q6P1R3 559 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 OR5B17Q8NGF7 314 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 SLC9A6Q92581 669 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 FEM1CQ96JP0 617 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 COPS8Q99627 209 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 NPAS2Q99743 824 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 MAP4K5Q9Y4K4 846 aa11.07□□□□□ -0.64
KNOP1-201ENST00000219837 TAF4O00268 1085 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 MEIS2O14770 477 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 AVPR1BP47901 424 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 PDX1P52945 283 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 CACNG1Q06432 222 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 MED22Q15528 200 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 CERCAMQ5T4B2 595 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 PIK3R6Q5UE93 754 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 RFWD3Q6PCD5 774 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 SLC43A3Q8NBI5 491 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 OR2L5Q8NG80 312 aa11.06□□□□□ -0.64
KNOP1-201ENST00000219837 IL31RAQ8NI17 732 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms