RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 CARS2Q9HA77 564 aaKnown RBP11.17□□□□□ -0.62
TARDBP-221ENST00000619555 NOD2Q9HC29 1040 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 SPATS2LQ9NUQ6 558 aaKnown RBP11.17□□□□□ -0.62
TARDBP-221ENST00000619555 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.17□□□□□ -0.62
TARDBP-221ENST00000619555 LRIT1Q9P2V4 623 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 PISDQ9UG56 409 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 APPL1Q9UKG1 709 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 LOXL2Q9Y4K0 774 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 PCDHGA7Q9Y5G6 932 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 SCINQ9Y6U3 715 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 TENM4Q6N022 2769 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 ASH1LQ9NR48 2969 aaKnown RBP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 A0A0U1RQS6 177 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 PRSS38A1L453 326 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 B4GAT1O43505 415 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 MAFKO60675 156 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 HEXIM1O94992 359 aaKnown RBP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 CPP00450 1065 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 CYP1A2P05177 515 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 CEACAM5P06731 702 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 JMJD7P0C870 316 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 MYBL1P10243 752 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 RARAP10276 462 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 KRT10P13645 584 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 ITIH1P19827 911 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 LHCGRP22888 699 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 ARL4AP40617 200 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 ETV5P41161 510 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 ETV3P41162 512 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 MAZP56270 477 aaKnown RBP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 B4GALNT1Q00973 533 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 ZFP36L1Q07352 338 aaKnown RBP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 SRSF6Q13247 344 aaKnown RBP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 ARHGEF7Q14155 803 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 BOLA3Q53S33 107 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 TMCO3Q6UWJ1 677 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 SPRED1Q7Z699 444 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 HEATR4Q86WZ0 1026 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 NRROSQ86YC3 692 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 CBARPQ8N350 705 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 SPOCK2Q92563 424 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 BTBD6Q96KE9 485 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 CSPG4P5Q96PW8 444 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 SMIM14Q96QK8 99 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 NUDCD1Q96RS6 583 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 CCNL2Q96S94 520 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 ANP32EQ9BTT0 268 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 TEX101Q9BY14 249 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 MRPL47Q9HD33 250 aaKnown RBP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 PHPT1Q9NRX4 125 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.16□□□□□ -0.62
TARDBP-221ENST00000619555 PHTF1Q9UMS5 762 aa11.16□□□□□ -0.62
TARDBP-221ENST00000619555 GOLGA6CA6NDK9 693 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 GOLGA6BA6NDN3 693 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 NPIPB15A6NHN6 443 aaPredicted RBP11.15□□□□□ -0.62
TARDBP-221ENST00000619555 SOCS5O75159 536 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 FGF1P05230 155 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 GOLGA6DP0CG33 693 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 MYCLP1P12525 358 aaPredicted RBP11.15□□□□□ -0.62
TARDBP-221ENST00000619555 CCNB1P14635 433 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 PNLIPP16233 465 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 CTPS1P17812 591 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 FECHP22830 423 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 AK4P27144 223 aaPredicted RBP11.15□□□□□ -0.62
TARDBP-221ENST00000619555 CDC25BP30305 580 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 HSPA9P38646 679 aaKnown RBP11.15□□□□□ -0.62
TARDBP-221ENST00000619555 GNPDA1P46926 289 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 POLD2P49005 469 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 OR1D5P58170 312 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 TSR1Q2NL82 804 aaKnown RBP11.15□□□□□ -0.62
TARDBP-221ENST00000619555 AMZ1Q400G9 498 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 RFLNAQ6ZTI6 216 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 Q6ZVL8 140 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 TSPAN33Q86UF1 283 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 C17orf82Q86X59 251 aaPredicted RBP11.15□□□□□ -0.62
TARDBP-221ENST00000619555 CPNE8Q86YQ8 564 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 SLITRK4Q8IW52 837 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 ATPAF2Q8N5M1 289 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 SPC24Q8NBT2 197 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 GPBAR1Q8TDU6 330 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 ZDHHC1Q8WTX9 485 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 TRIM11Q96F44 468 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 DTD2Q96FN9 168 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 MGME1Q9BQP7 344 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 FRMD8Q9BZ67 464 aaPredicted RBP11.15□□□□□ -0.62
TARDBP-221ENST00000619555 SEMA6CQ9H3T2 930 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 DEF6Q9H4E7 631 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 PCDH18Q9HCL0 1135 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 ZNHIT6Q9NWK9 470 aaKnown RBP11.15□□□□□ -0.62
TARDBP-221ENST00000619555 GOLGA6AQ9NYA3 693 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 PLEKHM1Q9Y4G2 1056 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 ST14Q9Y5Y6 855 aa11.15□□□□□ -0.62
TARDBP-221ENST00000619555 MYO18BQ8IUG5 2567 aa11.15□□□□□ -0.63
TARDBP-221ENST00000619555 PRAMEF33A0A0G2JMD5 474 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 A0A1W2PQ67 120 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 CAPN8A6NHC0 703 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 NVLO15381 856 aaKnown RBP11.14□□□□□ -0.63
TARDBP-221ENST00000619555 NUDT21O43809 227 aaKnown RBP11.14□□□□□ -0.63
TARDBP-221ENST00000619555 AKR1B10O60218 316 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms